Hierarchy For All Packages

Package Hierarchies:

• org.apache.ctakes.assertion.attributes,
• org.apache.ctakes.assertion.attributes.features,
• org.apache.ctakes.assertion.attributes.features.selection,
• org.apache.ctakes.assertion.attributes.generic,
• org.apache.ctakes.assertion.attributes.history,
• org.apache.ctakes.assertion.attributes.subject,
• org.apache.ctakes.assertion.cc,
• org.apache.ctakes.assertion.cr,
• org.apache.ctakes.assertion.eval,
• org.apache.ctakes.assertion.medfacts,
• org.apache.ctakes.assertion.medfacts.cleartk,
• org.apache.ctakes.assertion.medfacts.cleartk.extractors,
• org.apache.ctakes.assertion.medfacts.i2b2.api,
• org.apache.ctakes.assertion.medfacts.types,
• org.apache.ctakes.assertion.pipelines,
• org.apache.ctakes.assertion.stub,
• org.apache.ctakes.assertion.train,
• org.apache.ctakes.assertion.util,
• org.apache.ctakes.assertion.zoner.types,
• org.apache.ctakes.chunker.ae,
• org.apache.ctakes.chunker.ae.adjuster,
• org.apache.ctakes.clinicalpipeline,
• org.apache.ctakes.clinicalpipeline.ae,
• org.apache.ctakes.clinicalpipeline.runtime,
• org.apache.ctakes.constituency.parser,
• org.apache.ctakes.constituency.parser.ae,
• org.apache.ctakes.constituency.parser.treekernel,
• org.apache.ctakes.constituency.parser.uima.co,
• org.apache.ctakes.constituency.parser.uima.type,
• org.apache.ctakes.constituency.parser.util,
• org.apache.ctakes.contexttokenizer.ae,
• org.apache.ctakes.core.ae,
• org.apache.ctakes.core.cc,
• org.apache.ctakes.core.cc.pretty,
• org.apache.ctakes.core.cc.pretty.cell,
• org.apache.ctakes.core.cc.pretty.html,
• org.apache.ctakes.core.cc.pretty.plaintext,
• org.apache.ctakes.core.cc.pretty.row,
• org.apache.ctakes.core.cc.pretty.textspan,
• org.apache.ctakes.core.cc.property.plaintext,
• org.apache.ctakes.core.ci,
• org.apache.ctakes.core.cleartk,
• org.apache.ctakes.core.config,
• org.apache.ctakes.core.cpe,
• org.apache.ctakes.core.cr,
• org.apache.ctakes.core.fsm.adapters,
• org.apache.ctakes.core.fsm.condition,
• org.apache.ctakes.core.fsm.machine,
• org.apache.ctakes.core.fsm.output,
• org.apache.ctakes.core.fsm.state,
• org.apache.ctakes.core.fsm.token,
• org.apache.ctakes.core.fsm.token.adapter,
• org.apache.ctakes.core.knowtator,
• org.apache.ctakes.core.nlp.tokenizer,
• org.apache.ctakes.core.pipeline,
• org.apache.ctakes.core.resource,
• org.apache.ctakes.core.sentence,
• org.apache.ctakes.core.util,
• org.apache.ctakes.core.util.collection,
• org.apache.ctakes.core.util.regex,
• org.apache.ctakes.coreference.ae,
• org.apache.ctakes.coreference.ae.features,
• org.apache.ctakes.coreference.ae.features.cluster,
• org.apache.ctakes.coreference.ae.features.salience,
• org.apache.ctakes.coreference.ae.pairing,
• org.apache.ctakes.coreference.ae.pairing.cluster,
• org.apache.ctakes.coreference.cc,
• org.apache.ctakes.coreference.eval,
• org.apache.ctakes.coreference.eval.helpers,
• org.apache.ctakes.coreference.extractors,
• org.apache.ctakes.coreference.factory,
• org.apache.ctakes.coreference.treekernel.training,
• org.apache.ctakes.coreference.type,
• org.apache.ctakes.coreference.util,
• org.apache.ctakes.dependency.parser,
• org.apache.ctakes.dependency.parser.ae,
• org.apache.ctakes.dependency.parser.ae.util,
• org.apache.ctakes.dependency.parser.cr,
• org.apache.ctakes.dependency.parser.util,
• org.apache.ctakes.dictionary.assertion,
• org.apache.ctakes.dictionary.lookup,
• org.apache.ctakes.dictionary.lookup.ae,
• org.apache.ctakes.dictionary.lookup.algorithms,
• org.apache.ctakes.dictionary.lookup.filter,
• org.apache.ctakes.dictionary.lookup.jdbc,
• org.apache.ctakes.dictionary.lookup.lucene,
• org.apache.ctakes.dictionary.lookup.phrasebuilder,
• org.apache.ctakes.dictionary.lookup.strtable,
• org.apache.ctakes.dictionary.lookup.vo,
• org.apache.ctakes.dictionary.lookup2.ae,
• org.apache.ctakes.dictionary.lookup2.concept,
• org.apache.ctakes.dictionary.lookup2.consumer,
• org.apache.ctakes.dictionary.lookup2.dictionary,
• org.apache.ctakes.dictionary.lookup2.term,
• org.apache.ctakes.dictionary.lookup2.textspan,
• org.apache.ctakes.dictionary.lookup2.util,
• org.apache.ctakes.drugner,
• org.apache.ctakes.drugner.ae,
• org.apache.ctakes.drugner.ae.impl,
• org.apache.ctakes.drugner.cc,
• org.apache.ctakes.drugner.elements,
• org.apache.ctakes.drugner.fsm.elements.conditions,
• org.apache.ctakes.drugner.fsm.machines.elements,
• org.apache.ctakes.drugner.fsm.machines.util,
• org.apache.ctakes.drugner.fsm.output.elements,
• org.apache.ctakes.drugner.fsm.output.util,
• org.apache.ctakes.drugner.fsm.states.util,
• org.apache.ctakes.drugner.type,
• org.apache.ctakes.examples.ae,
• org.apache.ctakes.examples.pipeline,
• org.apache.ctakes.gui.action,
• org.apache.ctakes.gui.component,
• org.apache.ctakes.gui.dictionary,
• org.apache.ctakes.gui.dictionary.umls,
• org.apache.ctakes.gui.dictionary.util,
• org.apache.ctakes.gui.pipeline,
• org.apache.ctakes.gui.pipeline.bit,
• org.apache.ctakes.gui.pipeline.bit.available,
• org.apache.ctakes.gui.pipeline.bit.info,
• org.apache.ctakes.gui.pipeline.bit.parameter,
• org.apache.ctakes.gui.pipeline.bit.user,
• org.apache.ctakes.gui.pipeline.piper,
• org.apache.ctakes.gui.util,
• org.apache.ctakes.jdl,
• org.apache.ctakes.jdl.common,
• org.apache.ctakes.jdl.data.base,
• org.apache.ctakes.jdl.data.loader,
• org.apache.ctakes.jdl.data.xml,
• org.apache.ctakes.jdl.data.xml.jaxb,
• org.apache.ctakes.jdl.schema.xdl,
• org.apache.ctakes.lvg.ae,
• org.apache.ctakes.lvg.resource,
• org.apache.ctakes.necontexts,
• org.apache.ctakes.necontexts.negation,
• org.apache.ctakes.necontexts.status,
• org.apache.ctakes.postagger,
• org.apache.ctakes.preprocessor,
• org.apache.ctakes.preprocessor.ae,
• org.apache.ctakes.preprocessor.test,
• org.apache.ctakes.relationextractor.ae,
• org.apache.ctakes.relationextractor.ae.baselines,
• org.apache.ctakes.relationextractor.ae.features,
• org.apache.ctakes.relationextractor.data,
• org.apache.ctakes.relationextractor.data.analysis,
• org.apache.ctakes.relationextractor.eval,
• org.apache.ctakes.relationextractor.knowtator,
• org.apache.ctakes.relationextractor.metastasis,
• org.apache.ctakes.relationextractor.pipelines,
• org.apache.ctakes.sideeffect.ae,
• org.apache.ctakes.sideeffect.cc,
• org.apache.ctakes.sideeffect.type,
• org.apache.ctakes.sideeffect.util,
• org.apache.ctakes.smokingstatus,
• org.apache.ctakes.smokingstatus.ae,
• org.apache.ctakes.smokingstatus.cc,
• org.apache.ctakes.smokingstatus.context,
• org.apache.ctakes.smokingstatus.context.negation,
• org.apache.ctakes.smokingstatus.i2b2.type,
• org.apache.ctakes.smokingstatus.lookup.ae,
• org.apache.ctakes.smokingstatus.machine,
• org.apache.ctakes.smokingstatus.MLutil,
• org.apache.ctakes.smokingstatus.patientLevel,
• org.apache.ctakes.smokingstatus.type,
• org.apache.ctakes.smokingstatus.type.libsvm,
• org.apache.ctakes.smokingstatus.util,
• org.apache.ctakes.template.filler.ae,
• org.apache.ctakes.temporal.ae,
• org.apache.ctakes.temporal.ae.baselines,
• org.apache.ctakes.temporal.ae.feature,
• org.apache.ctakes.temporal.ae.feature.duration,
• org.apache.ctakes.temporal.ae.feature.selection,
• org.apache.ctakes.temporal.ae.feature.treekernel,
• org.apache.ctakes.temporal.data.analysis,
• org.apache.ctakes.temporal.duration,
• org.apache.ctakes.temporal.eval,
• org.apache.ctakes.temporal.keras,
• org.apache.ctakes.temporal.nn.ae,
• org.apache.ctakes.temporal.nn.data,
• org.apache.ctakes.temporal.nn.eval,
• org.apache.ctakes.temporal.pipelines,
• org.apache.ctakes.temporal.utils,
• org.apache.ctakes.typesystem.type.constants,
• org.apache.ctakes.typesystem.type.refsem,
• org.apache.ctakes.typesystem.type.relation,
• org.apache.ctakes.typesystem.type.structured,
• org.apache.ctakes.typesystem.type.syntax,
• org.apache.ctakes.typesystem.type.temporary.assertion,
• org.apache.ctakes.typesystem.type.textsem,
• org.apache.ctakes.typesystem.type.textspan,
• org.apache.ctakes.typesystem.type.util,
• org.apache.ctakes.utils.distsem,
• org.apache.ctakes.utils.env,
• org.apache.ctakes.utils.kernel,
• org.apache.ctakes.utils.struct,
• org.apache.ctakes.utils.test,
• org.apache.ctakes.utils.tree,
• org.apache.ctakes.utils.wiki,
• org.apache.ctakes.utils.xcas_comparison,
• org.apache.ctakes.ytex,
• org.apache.ctakes.ytex.dao,
• org.apache.ctakes.ytex.kernel,
• org.apache.ctakes.ytex.kernel.dao,
• org.apache.ctakes.ytex.kernel.evaluator,
• org.apache.ctakes.ytex.kernel.metric,
• org.apache.ctakes.ytex.kernel.model,
• org.apache.ctakes.ytex.kernel.pagerank,
• org.apache.ctakes.ytex.kernel.tree,
• org.apache.ctakes.ytex.kernel.wsd,
• org.apache.ctakes.ytex.libsvm,
• org.apache.ctakes.ytex.R,
• org.apache.ctakes.ytex.semil,
• org.apache.ctakes.ytex.sparsematrix,
• org.apache.ctakes.ytex.svmlight,
• org.apache.ctakes.ytex.tools,
• org.apache.ctakes.ytex.tools.docanalyzer,
• org.apache.ctakes.ytex.uima,
• org.apache.ctakes.ytex.uima.annotators,
• org.apache.ctakes.ytex.uima.dao,
• org.apache.ctakes.ytex.uima.lookup.ae,
• org.apache.ctakes.ytex.uima.mapper,
• org.apache.ctakes.ytex.uima.model,
• org.apache.ctakes.ytex.uima.resource,
• org.apache.ctakes.ytex.uima.types,
• org.apache.ctakes.ytex.umls.dao,
• org.apache.ctakes.ytex.umls.model,
• org.apache.ctakes.ytex.web.search,
• org.apache.ctakes.ytex.weka,
• org.apache.ctakes.ytex.ws,
• org.mitre.medfacts.uima

Class Hierarchy

• java.lang.Object
  • org.apache.ctakes.ytex.kernel.AbstractBagOfWordsExporter
    • org.apache.ctakes.ytex.weka.WekaBagOfWordsExporterImpl (implements org.apache.ctakes.ytex.weka.WekaBagOfWordsExporter)
      • org.apache.ctakes.ytex.weka.GramMatrixExporterImpl (implements org.apache.ctakes.ytex.weka.GramMatrixExporter)
  • org.apache.ctakes.dictionary.lookup.AbstractBaseDictionary (implements org.apache.ctakes.dictionary.lookup.Dictionary)
    • org.apache.ctakes.dictionary.lookup.jdbc.JdbcDictionaryImpl
    • org.apache.ctakes.dictionary.lookup.lucene.LuceneDictionaryImpl
    • org.apache.ctakes.dictionary.lookup.strtable.StringTableDictionaryImpl
  • org.apache.ctakes.dictionary.lookup.AbstractBaseMetaDataHit (implements org.apache.ctakes.dictionary.lookup.MetaDataHit)
    • org.apache.ctakes.dictionary.lookup.GenericMetaDataHitImpl
    • org.apache.ctakes.dictionary.lookup.lucene.LuceneDocumentMetaDataHitImpl
    • org.apache.ctakes.dictionary.lookup.strtable.StringTableRowMetaDataHitImpl
  • javax.swing.AbstractCellEditor (implements javax.swing.CellEditor, java.io.Serializable)
    • org.apache.ctakes.gui.component.FileTableCellEditor (implements java.awt.event.ActionListener, javax.swing.table.TableCellEditor, javax.swing.table.TableCellRenderer)
  • org.apache.ctakes.coreference.util.AbstractClassifier
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.AbstractSequentialList<E>
        • java.util.LinkedList<E> (implements java.lang.Cloneable, java.util.Deque<E>, java.util.List<E>, java.io.Serializable)
          • org.apache.ctakes.dependency.parser.util.DependencyPath
  • org.apache.ctakes.dictionary.lookup2.concept.AbstractConceptFactory (implements org.apache.ctakes.dictionary.lookup2.concept.ConceptFactory)
    • org.apache.ctakes.dictionary.lookup2.concept.JdbcConceptFactory
    • org.apache.ctakes.dictionary.lookup2.concept.MemConceptFactory
  • org.apache.ctakes.core.cc.pretty.cell.AbstractItemCell (implements org.apache.ctakes.core.cc.pretty.cell.ItemCell)
    • org.apache.ctakes.core.cc.pretty.cell.DefaultBaseItemCell (implements org.apache.ctakes.core.cc.pretty.cell.BaseItemCell)
    • org.apache.ctakes.core.cc.pretty.cell.DefaultUmlsItemCell (implements org.apache.ctakes.core.cc.pretty.cell.UmlsItemCell)
    • org.apache.ctakes.core.cc.pretty.cell.EventCell
    • org.apache.ctakes.core.cc.pretty.cell.TimexCell
  • org.apache.ctakes.core.cc.AbstractJdbcWriter.TableSqlInfo
  • javax.swing.AbstractListModel<E> (implements javax.swing.ListModel<E>, java.io.Serializable)
    • org.apache.ctakes.gui.pipeline.bit.available.AvailablesListModel
    • org.apache.ctakes.gui.pipeline.bit.user.UserBitListModel
  • java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
    • java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
      • org.apache.ctakes.utils.struct.CounterMap<K>
      • org.apache.ctakes.assertion.util.SemanticClasses
  • org.apache.ctakes.dictionary.lookup2.dictionary.AbstractRareWordDictionary (implements org.apache.ctakes.dictionary.lookup2.dictionary.RareWordDictionary)
    • org.apache.ctakes.dictionary.lookup2.dictionary.JdbcRareWordDictionary
    • org.apache.ctakes.dictionary.lookup2.dictionary.MemRareWordDictionary
  • org.apache.ctakes.dictionary.lookup2.consumer.AbstractTermConsumer (implements org.apache.ctakes.dictionary.lookup2.consumer.TermConsumer)
    • org.apache.ctakes.dictionary.lookup2.consumer.DefaultTermConsumer
    • org.apache.ctakes.dictionary.lookup2.consumer.PrecisionTermConsumer
    • org.apache.ctakes.dictionary.lookup2.consumer.SemanticCleanupTermConsumer
  • org.apache.ctakes.typesystem.type.syntax.ADJP
  • org.apache.ctakes.typesystem.type.syntax.ADJP
  • org.apache.ctakes.typesystem.type.syntax.ADJP
  • org.apache.ctakes.typesystem.type.syntax.ADJP_Type
  • org.apache.ctakes.typesystem.type.syntax.ADJP_Type
  • org.apache.ctakes.typesystem.type.syntax.ADJP_Type
  • org.apache.ctakes.typesystem.type.syntax.ADVP
  • org.apache.ctakes.typesystem.type.syntax.ADVP
  • org.apache.ctakes.typesystem.type.syntax.ADVP
  • org.apache.ctakes.typesystem.type.syntax.ADVP_Type
  • org.apache.ctakes.typesystem.type.syntax.ADVP_Type
  • org.apache.ctakes.typesystem.type.syntax.ADVP_Type
  • org.apache.ctakes.typesystem.type.relation.Affects
  • org.apache.ctakes.typesystem.type.relation.Affects
  • org.apache.ctakes.typesystem.type.relation.Affects
  • org.apache.ctakes.typesystem.type.relation.Affects_Type
  • org.apache.ctakes.typesystem.type.relation.Affects_Type
  • org.apache.ctakes.typesystem.type.relation.Affects_Type
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation_Type
  • org.apache.uima.analysis_component.AnalysisComponent_ImplBase (implements org.apache.uima.analysis_component.AnalysisComponent)
    • org.apache.uima.analysis_component.Annotator_ImplBase
      • org.apache.uima.analysis_component.CasAnnotator_ImplBase
        • org.apache.uima.fit.component.CasConsumer_ImplBase
          • org.apache.ctakes.core.cc.AbstractOutputFileWriter
            • org.apache.ctakes.core.cc.FileTreeXmiWriter
            • org.apache.ctakes.core.cc.pretty.plaintext.PrettyTextWriterFit
          • org.apache.ctakes.core.cc.CuiCountFileWriter
          • org.apache.ctakes.core.cc.pretty.html.HtmlTextWriter
          • org.apache.ctakes.core.cc.property.plaintext.PropertyTextWriterFit
          • org.apache.ctakes.core.cc.TextSpanWriter
          • org.apache.ctakes.core.cc.XmiWriterCasConsumerCtakes
      • org.apache.uima.analysis_component.JCasAnnotator_ImplBase
        • org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine
        • org.apache.ctakes.smokingstatus.ae.ClassifiableEntries
        • org.apache.ctakes.assertion.medfacts.ConceptConverterAnalysisEngine
        • org.apache.ctakes.drugner.ae.CopyDrugAnnotator
        • org.apache.ctakes.ytex.uima.annotators.DateAnnotator
        • org.apache.ctakes.ytex.uima.annotators.DBConsumer
        • org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
          • org.apache.ctakes.dictionary.lookup.ae.UmlsDictionaryLookupAnnotator
        • org.apache.ctakes.drugner.ae.DrugMentionAnnotator
        • org.apache.ctakes.clinicalpipeline.ae.ExtractionPrepAnnotator
        • org.apache.ctakes.core.ae.FilterAnnotator
        • org.apache.uima.fit.component.JCasAnnotator_ImplBase
          • org.apache.ctakes.dictionary.lookup2.ae.AbstractJCasTermAnnotator (implements org.apache.ctakes.dictionary.lookup2.ae.JCasTermAnnotator, org.apache.ctakes.dictionary.lookup2.ae.WindowProcessor)
            • org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator
            • org.apache.ctakes.dictionary.lookup2.ae.OverlapJCasTermAnnotator
          • org.apache.ctakes.assertion.medfacts.cleartk.AlternateCuePhraseAnnotator
          • org.apache.ctakes.relationextractor.metastasis.AnatomicalSiteListExtractorPipeline.ListAndConjunctionAe
          • org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngineFit
          • org.apache.ctakes.assertion.eval.AssertionEvaluation.OnlyGoldAssertions
          • org.apache.ctakes.assertion.eval.AssertionEvaluation.ReferenceAnnotationsSystemAssertionClearer
          • org.apache.ctakes.assertion.eval.AssertionEvaluation.ReferenceIdentifiedAnnotationsSystemToGoldCopier
          • org.apache.ctakes.assertion.eval.AssertionEvaluation.ReferenceSupportingAnnotationsSystemToGoldCopier
          • org.apache.ctakes.assertion.eval.AssertionEvaluation.ReplaceCTakesEntityMentionsAndModifiersWithGold
          • org.apache.ctakes.preprocessor.ae.CdaCasInitializer
          • org.apache.ctakes.core.ae.CDASegmentAnnotator
          • org.apache.ctakes.chunker.ae.adjuster.ChunkAdjuster
          • org.apache.ctakes.chunker.ae.Chunker
          • org.apache.ctakes.dependency.parser.ae.ClearNLPDependencyParserAE
          • org.apache.ctakes.postagger.ClearNLPPOSTaggerAE
          • org.apache.ctakes.dependency.parser.ae.ClearNLPSemanticRoleLabelerAE
          • org.cleartk.ml.CleartkAnnotator<OUTCOME_TYPE> (implements org.apache.uima.fit.factory.initializable.Initializable)
            • org.apache.ctakes.assertion.medfacts.cleartk.AssertionCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.ConditionalCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.GenericCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.HistoryCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.PolarityCleartkAnalysisEngine
                • org.apache.ctakes.assertion.medfacts.cleartk.PolarityFedaCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.SubjectCleartkAnalysisEngine
              • org.apache.ctakes.assertion.medfacts.cleartk.UncertaintyCleartkAnalysisEngine
            • org.apache.ctakes.temporal.ae.ContextualModalityAnnotator
            • org.apache.ctakes.temporal.ae.DocTimeRelAnnotator
            • org.apache.ctakes.temporal.ae.EventAdmissionTimeAnnotator
            • org.apache.ctakes.temporal.ae.EventDischargeTimeAnnotator
            • org.apache.ctakes.temporal.ae.EventEventCNNAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventEventPosBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventEventPositionBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventEventTokenAndBIOBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventEventTokenAndPosBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventEventTokenBasedAnnotator
            • org.apache.ctakes.temporal.ae.EventTimeCNNAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventTimePosBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventTimePositionBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventTimeTokenAndBIOBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventTimeTokenAndPosBasedAnnotator
            • org.apache.ctakes.temporal.nn.ae.EventTimeTokenBasedAnnotator
            • org.apache.ctakes.coreference.ae.MarkableSalienceAnnotator
            • org.apache.ctakes.coreference.ae.MentionClusterCoreferenceAnnotator
            • org.apache.ctakes.coreference.ae.MentionClusterRankingCoreferenceAnnotator
            • org.apache.ctakes.relationextractor.ae.ModifierExtractorAnnotator
            • org.apache.ctakes.relationextractor.ae.RelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline1EntityMentionPairRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline2DegreeOfRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline2EntityMentionPairRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline3DegreeOfRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline3EntityMentionPairRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.baselines.Baseline4EntityMentionPairRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.CausesBringsAboutRelationExtractorAnnotator
              • org.apache.ctakes.temporal.ae.ConsecutiveSentencesEventEventRelationAnnotator
              • org.apache.ctakes.temporal.ae.ConsecutiveSentencesEventTimeRelationAnnotator
              • org.apache.ctakes.relationextractor.ae.DegreeOfRelationExtractorAnnotator
                • org.apache.ctakes.relationextractor.ae.baselines.Baseline1DegreeOfRelationExtractorAnnotator
                • org.apache.ctakes.relationextractor.ae.baselines.Baseline4DegreeOfRelationExtractorAnnotator
              • org.apache.ctakes.coreference.ae.EventCoreferenceAnnotator
              • org.apache.ctakes.temporal.ae.EventEventI2B2RelationAnnotator
              • org.apache.ctakes.temporal.ae.EventEventRelationGoldContainerAnnotator
              • org.apache.ctakes.temporal.ae.EventEventRelationSeedBasedAnnotator
              • org.apache.ctakes.temporal.ae.EventTimeI2B2RelationAnnotator
              • org.apache.ctakes.temporal.ae.EventTimeRelationAnnotator
              • org.apache.ctakes.temporal.ae.baselines.F1BaselineEventTimeRelationAnnotator
              • org.apache.ctakes.relationextractor.ae.LocationOfRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.ManagesTreatsRelationExtractorAnnotator
              • org.apache.ctakes.relationextractor.ae.ManifestationOfRelationExtractorAnnotator
              • org.apache.ctakes.temporal.ae.baselines.PrecisionBaselineEventTimeRelationAnnotator
              • org.apache.ctakes.temporal.ae.baselines.RecallBaselineEventEventRelationAnnotator
              • org.apache.ctakes.temporal.ae.baselines.RecallBaselineEventTimeRelationAnnotator
              • org.apache.ctakes.temporal.ae.baselines.TimidBaselineEventTimeRelationAnnotator
              • org.apache.ctakes.temporal.ae.baselines.TreeHeightBaseline
            • org.apache.ctakes.core.ae.SentenceDetectorAnnotatorBIO
            • org.apache.ctakes.temporal.ae.TemporalEntityAnnotator_ImplBase
              • org.apache.ctakes.temporal.ae.BackwardsTimeAnnotator
              • org.apache.ctakes.temporal.ae.ConstituencyBasedTimeAnnotator
              • org.apache.ctakes.temporal.ae.EventAnnotator
              • org.apache.ctakes.temporal.ae.NEPredicateEventAnnotator
              • org.apache.ctakes.temporal.ae.TimeAnnotator
            • org.apache.ctakes.temporal.ae.TemporalRelationExtractorAnnotator
              • org.apache.ctakes.temporal.ae.EventEventRelationAnnotator
              • org.apache.ctakes.temporal.ae.EventTimeSelfRelationAnnotator
              • org.apache.ctakes.temporal.ae.NeuralEventTimeSelfRelationAnnotator
            • org.apache.ctakes.temporal.ae.TimexAdmissionTimeAnnotator
            • org.apache.ctakes.temporal.ae.TimexDischargeTimeAnnotator
          • org.apache.ctakes.temporal.ae.ClearTKDocTimeRelAnnotator
          • org.apache.ctakes.temporal.ae.ClearTKDocumentCreationTimeAnnotator
          • org.apache.ctakes.temporal.ae.ClearTKLinkToTHYMELinkAnnotator
          • org.cleartk.ml.CleartkSequenceAnnotator<OUTCOME_TYPE> (implements org.apache.uima.fit.factory.initializable.Initializable)
            • org.apache.ctakes.temporal.ae.TemporalSequenceAnnotator_ImplBase
              • org.apache.ctakes.temporal.ae.CRFTimeAnnotator
              • org.apache.ctakes.temporal.ae.EventEventCRFRelationAnnotator
              • org.apache.ctakes.temporal.ae.MetaTimeAnnotator
          • org.apache.ctakes.clinicalpipeline.ClinicalPipelineFactory.CopyNPChunksToLookupWindowAnnotations
          • org.apache.ctakes.clinicalpipeline.ClinicalPipelineFactory.RemoveEnclosedLookupWindows
          • org.apache.ctakes.constituency.parser.ae.ConstituencyParser
          • org.apache.ctakes.necontexts.ContextAnnotator
          • org.apache.ctakes.contexttokenizer.ae.ContextDependentTokenizerAnnotator
          • org.apache.ctakes.core.ae.CopyAnnotator
          • org.apache.ctakes.coreference.ae.CoreferenceChainScoringOutput
          • org.apache.ctakes.temporal.ae.CrossSentenceTemporalRelationAnnotator
          • org.apache.ctakes.core.pipeline.CuiCollector.CuiCollectorEngine
          • org.apache.ctakes.temporal.ae.DeepPheAnaforaXMLReader
          • org.apache.ctakes.coreference.ae.DeterministicMarkableAnnotator
          • org.apache.ctakes.core.ae.DocumentIdPrinterAnalysisEngine
          • org.apache.ctakes.temporal.nn.data.DtrRelPrinter.DocTimeRelSnippetPrinter
          • org.apache.ctakes.core.pipeline.EntityCollector.EntityCollectorEngine
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.CopyFromGold
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.CopyFromSystem
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.EntityMentionRemover
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.EventMentionRemover
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.PittHeaderAnnotator
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.RemoveEnclosedLookupWindows
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.TimexAnnotationCorrector
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.WriteAnaforaXML
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.WriteI2B2XML
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.XMIReader
          • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.XMIWriter
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.RemoveNonTLINKRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfClearTKEventProperties.ClearEventProperties
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.CopyCoreferenceRelations
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.CopyGoldMarkablesInChains
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.DocumentIDPrinter
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.ParagraphAnnotator
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.ParagraphVectorAnnotator
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.RelationPropagator
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.RemoveAllCoreferenceAnnotations
          • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.RemovePersonMarkables
          • org.apache.ctakes.temporal.eval.EvaluationOfEventDocTimeRelDeepPhe.ClearEventProperties
          • org.apache.ctakes.temporal.eval.EvaluationOfEventDocTimeRelDeepPhe.CopyHeadEventDocTimeRel2GoldEvent
          • org.apache.ctakes.temporal.eval.EvaluationOfEventDocTimeRelDeepPhe.KeepEventMentionsCoveredByGoldMentions
          • org.apache.ctakes.temporal.eval.EvaluationOfEventDocTimeRelDeepPhe.ReplaceCTakesMentionsWithGoldMentions
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.AddEEPotentialRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.RemoveLongDistanceEERelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.AddEEPotentialRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.CountCloseRelation
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.RemoveLongDistanceEERelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.RemoveLongDistanceEERelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.AddEEPotentialRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.CountCloseRelation
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventProperties.ClearEventProperties
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.AddEEPotentialRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.CountCloseRelation
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.RemoveLongDistanceEERelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.AddPotentialRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.CountCloseRelation
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.Overlap2Contains
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.RemoveEventEventRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.RemoveNonUMLSEtEvents
          • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.FindLongDisRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.RemoveNonTLINKRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.RemoveNullArgumentRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations.RemoveRelations
          • org.apache.ctakes.coreference.eval.EvaluationOfMarkableSalience.CreatePseudoGoldMarkables
          • org.apache.ctakes.coreference.eval.EvaluationOfMarkableSalience.SetGoldConfidence
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.AddClosure
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.RemoveNonTLINKRelations
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.RemoveNonUMLSEvents
          • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.AddClosure
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.OverwriteTemporalRelationToSystem
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.RemoveEventEventRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations.RemoveRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations_ImplBase.PreserveEventEventRelations
          • org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations_ImplBase.RemoveGoldAttributes
          • org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations_ImplBase.RemoveNonContainsRelations
          • org.apache.ctakes.relationextractor.data.analysis.EventAndEntityViewer.RelationContextPrinter
          • org.apache.ctakes.temporal.data.analysis.EventContextAnalysisPipeline.EventAndTokenContextWriter
          • org.apache.ctakes.temporal.duration.EventDurationDistribution.TemporalDurationExtractor
          • org.apache.ctakes.temporal.nn.data.EventEventAllPairRelPrinter.RelationSnippetPrinter
          • org.apache.ctakes.temporal.duration.EventEventDurationStatistics.AnalyseRelationArgumentDuration
          • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation.AddClosure
          • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation.AddEEPotentialRelations
          • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation.CountCloseRelation
          • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation.Overlap2Contains
          • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation.RemoveRelations
          • org.apache.ctakes.temporal.nn.data.EventEventRelPositionPrinter.RelationSnippetPrinter
          • org.apache.ctakes.temporal.nn.data.EventEventRelPrinter.RelationSnippetPrinter
          • org.apache.ctakes.temporal.data.analysis.EventPrinterPipeline.EventWriter
          • org.apache.ctakes.temporal.pipelines.EventPrintingPipeline.PrintEventAnnotations
          • org.apache.ctakes.temporal.duration.EventTimeDurationStatistics.AnalyseRelationArgumentDuration
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.AddClosure
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.AddContain2Overlap
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.AddFlippedOverlap
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.AddPotentialRelations
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.CountCloseRelation
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.Overlap2Contains
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.RemoveEventEventRelations
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.RemoveNonUMLSEtEvents
          • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation.RemoveRelations
          • org.apache.ctakes.temporal.nn.data.EventTimeRelPositionPrinter.RelationSnippetPrinter
          • org.apache.ctakes.temporal.nn.data.EventTimeRelPrinter.RelationSnippetPrinter
          • org.apache.ctakes.temporal.ae.EventToClearTKEventAnnotator
          • org.apache.ctakes.examples.ae.ExampleHelloWorldAnnotator
          • org.apache.ctakes.temporal.duration.ExtractDurationsUsingContainsRelation.ProcessRelations
          • org.apache.ctakes.temporal.pipelines.FullTemporalExtractionPipeline.CopyPropertiesToTemporalEventAnnotator
          • org.apache.ctakes.assertion.attributes.GenericAttributeAnalysisEngine
          • org.apache.ctakes.relationextractor.data.GoldAnnotationStatsCalculator
          • org.apache.ctakes.assertion.cr.GoldEntityAndAttributeReader
          • org.apache.ctakes.temporal.nn.data.GoldEventPrinter.EventPrinter
          • org.apache.ctakes.temporal.nn.data.GoldEventPrinterWithLabels.EventPrinter
          • org.apache.ctakes.relationextractor.data.analysis.GoldRelationViewer.RelationContextPrinter
          • org.apache.ctakes.temporal.data.analysis.GoldRelationViewer.RelationContextPrinter
          • org.apache.ctakes.temporal.ae.I2B2TemporalXMLReader
          • org.apache.ctakes.relationextractor.ae.IdentifiedAnnotationExpander
          • org.apache.ctakes.core.ae.ListAnnotator
          • org.apache.ctakes.core.ae.ListEntryNegator
          • org.apache.ctakes.core.ae.ListSentenceFixer
          • org.apache.ctakes.lvg.ae.LvgAnnotator
          • org.apache.ctakes.coreference.ae.MarkableHeadTreeCreator
          • org.apache.ctakes.assertion.eval.MergeGoldViewFromOneCasIntoInitialViewOfAnotherCas
          • org.apache.ctakes.relationextractor.metastasis.MetastasisAnaforaXMLReader
          • org.apache.ctakes.relationextractor.metastasis.MetastasisXmiGenerationPipeline.XMIWriter
          • org.apache.ctakes.assertion.cr.MiPACQKnowtatorXMLReader
          • org.apache.ctakes.coreference.ae.MipacqMarkableCreator
          • org.apache.ctakes.coreference.ae.MipacqMarkableExpander
          • org.apache.ctakes.coreference.ae.MipacqMarkablePairGenerator
          • org.apache.ctakes.coreference.ae.MipacqSvmChainCreator
          • org.apache.ctakes.relationextractor.eval.ModifierExtractorEvaluation.OnlyGoldModifiers
          • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation.AddClosure
          • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation.AddEEPotentialRelations
          • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation.CountCloseRelation
          • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation.Overlap2Contains
          • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation.RemoveRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.AddClosure
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.AddPotentialRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.CountCloseRelation
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.Overlap2Contains
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.RemoveEventEventRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.RemoveNonUMLSEtEvents
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation.RemoveRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.AddClosure
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.AddContain2Overlap
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.AddFlippedOverlap
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.AddPotentialRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.AddTransitiveContainsRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.CountCloseRelation
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.Overlap2Contains
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.RemoveCrossSentenceRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.RemoveEventEventRelations
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.RemoveNonUMLSEtEvents
          • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation.RemoveRelations
          • org.apache.ctakes.core.ae.ParagraphAnnotator
          • org.apache.ctakes.core.ae.ParagraphSentenceFixer
          • org.apache.ctakes.constituency.parser.ae.ParserEvaluationAnnotator
          • org.apache.ctakes.coreference.ae.PersonChainAnnotator
          • org.apache.ctakes.postagger.POSTagger
          • org.apache.ctakes.coreference.cc.PreprocessAndWriteXmi.SerializeDocumentToXMI
          • org.apache.ctakes.temporal.duration.PreserveCertainEventEventRelationsInGold
          • org.apache.ctakes.temporal.duration.PreserveCertainEventsInGold
          • org.apache.ctakes.temporal.duration.PreserveCertainEventTimeRelationsInGold
          • org.apache.ctakes.temporal.duration.PreserveUMLSEventEventRelationsInGold
          • org.apache.ctakes.temporal.duration.PreserveUMLSEventTimeRelationsInGold
          • org.apache.ctakes.temporal.data.analysis.PrintNormalizedTemporalExpressions
          • org.apache.ctakes.core.ae.RegexSectionizer
            • org.apache.ctakes.core.ae.BsvRegexSectionizer
          • org.apache.ctakes.relationextractor.pipelines.RelationAnnotationViewer.RelationExtractorPrinter
          • org.apache.ctakes.temporal.data.analysis.RelationContextViewerPipeline.RelationContextPrinter
          • org.apache.ctakes.relationextractor.pipelines.RelationExtractorConsumer
          • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.AddPotentialRelations
          • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.RemoveCTakesMentionsAndCopyGoldRelations
          • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.RemoveSmallerEventMentions
          • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.ReplaceCTakesMentionsWithGoldMentions
          • org.apache.ctakes.temporal.eval.RemoveTreeAlignedMentions
          • org.apache.ctakes.relationextractor.pipelines.SelectiveRelationAnnotationViewer.RelationExtractorPrinter
          • org.apache.ctakes.core.ae.SentenceDetector
          • org.apache.ctakes.core.ae.SHARPKnowtatorXMLReader
            • org.apache.ctakes.temporal.ae.THYMEKnowtatorXMLReader
          • org.apache.ctakes.relationextractor.eval.SHARPXMI.CopyDocumentTextToGoldView
          • org.apache.ctakes.relationextractor.eval.SHARPXMI.DocumentIDAnnotator
          • org.apache.ctakes.core.ae.SimpleSegmentAnnotator
          • org.apache.ctakes.core.ae.StartFinishLogger
          • org.apache.ctakes.assertion.attributes.SubjectAttributeAnalysisEngine
          • org.apache.ctakes.temporal.ae.TemporalRelationRuleAnnotator
          • org.apache.ctakes.lvg.ae.ThreadSafeLvg
          • org.apache.ctakes.temporal.ae.THYMEAnaforaXMLReader
            • org.apache.ctakes.temporal.ae.THYMEQAAnaforaXMLReader
          • org.apache.ctakes.temporal.ae.THYMETreebankReader
          • org.apache.ctakes.temporal.ae.TimexToClearTKTimexAnnotator
          • org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
          • org.apache.ctakes.relationextractor.pipelines.TreeFeatureConsumer
          • org.cleartk.util.ae.UriToDocumentTextAnnotator
            • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.UriToDocumentTextAnnotatorCtakes
            • org.apache.ctakes.relationextractor.metastasis.MetastasisXmiGenerationPipeline.UriToDocumentTextAnnotatorCtakes
          • org.apache.ctakes.temporal.ae.WithinSentenceBeforeRelationAnnotator
          • org.mitre.medfacts.uima.ZoneAnnotator
        • org.apache.uima.fit.component.JCasConsumer_ImplBase
          • org.apache.ctakes.assertion.cc.JudgeAttributeInstances
        • org.apache.ctakes.smokingstatus.ae.KuRuleBasedClassifierAnnotator
        • org.apache.ctakes.lvg.ae.LvgBaseTokenAnnotator
        • org.apache.ctakes.ytex.uima.annotators.MetaMapToCTakesAnnotator
        • org.apache.ctakes.ytex.uima.annotators.NamedEntityRegexAnnotator
        • org.apache.ctakes.ytex.uima.annotators.NegexAnnotator
        • org.apache.ctakes.core.ae.NullAnnotator
        • org.apache.ctakes.coreference.cc.ODIEVectorFileWriter
        • org.apache.ctakes.core.ae.OverlapAnnotator
        • org.apache.ctakes.smokingstatus.ae.PcsClassifierAnnotator_libsvm
        • org.apache.ctakes.sideeffect.ae.PSESentenceAnnotator
        • org.apache.ctakes.core.ae.SectionSegmentAnnotator
        • org.apache.ctakes.ytex.uima.annotators.SegmentRegexAnnotator
        • org.apache.ctakes.ytex.uima.annotators.SenseDisambiguatorAnnotator
        • org.apache.ctakes.smokingstatus.ae.SentenceAdjuster
        • org.apache.ctakes.ytex.uima.annotators.SentenceDetector
        • org.apache.ctakes.sideeffect.ae.SESentenceFeatureAnnotator
        • org.apache.ctakes.sideeffect.ae.SideEffectAnnotator
        • org.apache.ctakes.core.ae.SimpleSegmentWithTagsAnnotator
        • org.apache.ctakes.template.filler.ae.TemplateFillerAnnotator
        • org.apache.ctakes.dictionary.lookup.ae.ThreadedDictionaryLookupAnnotator
          • org.apache.ctakes.dictionary.lookup.ae.ThreadedUmlsDictionaryLookupAnnotator
        • org.apache.ctakes.core.ae.TokenizerAnnotator
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite_Type
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite_Type
  • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite_Type
  • org.apache.ctakes.relationextractor.metastasis.AnatomicalSiteListExtractorPipeline
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention_Type
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention_Type
  • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention_Type
  • org.apache.ctakes.ytex.uima.mapper.AnnoMappingInfo
  • org.apache.ctakes.assertion.stub.Annotation
    • org.apache.ctakes.assertion.stub.ConceptAnnotation
      • org.apache.ctakes.assertion.stub.AssertionAnnotation
  • org.apache.ctakes.preprocessor.Annotation
  • org.apache.ctakes.ytex.uima.model.AnnotationContainmentLink (implements java.io.Serializable)
  • org.apache.ctakes.coreference.util.AnnotationCounter
  • org.apache.ctakes.dependency.parser.util.AnnotationDepUtils
  • org.apache.ctakes.temporal.utils.AnnotationIdCollection
  • org.apache.ctakes.coreference.util.AnnotationSelector
  • org.apache.ctakes.assertion.eval.AnnotationStatisticsCompact<OUTCOME_TYPE> (implements java.io.Serializable)
  • org.apache.ctakes.constituency.parser.util.AnnotationTreeUtils
  • org.apache.uima.analysis_engine.annotator.Annotator_ImplBase (implements org.apache.uima.analysis_engine.annotator.BaseAnnotator)
    • org.apache.uima.analysis_engine.annotator.JTextAnnotator_ImplBase (implements org.apache.uima.analysis_engine.annotator.JTextAnnotator)
      • org.apache.ctakes.sideeffect.ae.SESentenceClassifierAnnotator
  • org.apache.ctakes.coreference.util.AnnotOffsetComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.assertion.stub.ApiConcept
  • org.apache.ctakes.jdl.App
  • org.apache.ctakes.jdl.AppJdl
  • org.apache.ctakes.ytex.uima.ApplicationContextHolder
  • org.apache.ctakes.jdl.AppMain
  • org.apache.ctakes.utils.wiki.ApproximateMath
  • org.apache.ctakes.temporal.nn.data.ArgContextProvider
  • org.apache.ctakes.assertion.cr.ArgumentInfo
  • org.apache.ctakes.relationextractor.knowtator.ArgumentInfo
  • org.apache.ctakes.relationextractor.ae.features.ArgumentOrderFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.core.util.collection.ArrayListMap<K,V> (implements org.apache.ctakes.core.util.collection.CollectionMap<K,V,T>)
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation_Type
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.AssertionAboveLeftTreeExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.assertion.medfacts.cleartk.AssertionComponents
  • org.apache.ctakes.assertion.util.AssertionConst
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation_Type
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation_Type
  • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation_Type
  • org.apache.ctakes.assertion.stub.AssertionDecoderConfiguration
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.AssertionDependencyTreeExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.assertion.util.AssertionDepUtils
  • org.apache.ctakes.assertion.eval.AssertionEvaluation.HashableAnnotation (implements java.lang.Comparable<T>)
  • org.apache.ctakes.assertion.eval.AssertionEvaluation.Options
  • org.apache.ctakes.assertion.stub.AssertionFileProcessor
  • org.apache.ctakes.assertion.medfacts.cleartk.AssertionSampleFeatureGenerator
  • org.apache.ctakes.assertion.util.AssertionTreeUtils
  • org.apache.ctakes.drugner.elements.AssociatedCodeElement
  • org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement
  • org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement
  • org.apache.ctakes.typesystem.type.refsem.Attribute
  • org.apache.ctakes.typesystem.type.refsem.Attribute
  • org.apache.ctakes.typesystem.type.refsem.Attribute
  • org.apache.ctakes.typesystem.type.refsem.Attribute_Type
  • org.apache.ctakes.typesystem.type.refsem.Attribute_Type
  • org.apache.ctakes.typesystem.type.refsem.Attribute_Type
  • org.apache.ctakes.coreference.util.AttributeCalculator
    • org.apache.ctakes.coreference.util.AnaphoricityAttributeCalculator
    • org.apache.ctakes.coreference.util.PairAttributeCalculator
      • org.apache.ctakes.coreference.util.SyntaxAttributeCalculator
  • org.apache.ctakes.coreference.ae.features.AttributeFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.ytex.kernel.evaluator.AttributeProductKernel (implements org.apache.ctakes.ytex.kernel.evaluator.Kernel)
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation_Type
  • org.apache.ctakes.typesystem.type.relation.AttributeRelation_Type
  • org.apache.ctakes.gui.dictionary.umls.AutoTermExtractor
  • org.apache.ctakes.gui.pipeline.bit.available.AvailablesRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.clinicalpipeline.runtime.BagOfAnnotationsGenerator<T,K>
    • org.apache.ctakes.clinicalpipeline.runtime.BagOfCUIsGenerator
  • org.apache.ctakes.ytex.kernel.BagOfWordsData
  • org.apache.ctakes.ytex.kernel.BaseClassifierEvaluationParser (implements org.apache.ctakes.ytex.kernel.ClassifierEvaluationParser)
    • org.apache.ctakes.ytex.libsvm.LibSVMParser
      • org.apache.ctakes.ytex.svmlight.SVMLightParser
    • org.apache.ctakes.ytex.semil.SemiLEvaluationParser
    • org.apache.ctakes.ytex.kernel.SvmlinEvaluationParser
  • org.apache.ctakes.ytex.kernel.BaseClassifierEvaluationParser.InstanceClassInfo
  • org.apache.ctakes.dictionary.lookup.BaseDictionaryImpl (implements org.apache.ctakes.dictionary.lookup.Dictionary)
  • org.apache.ctakes.dictionary.lookup.ae.BaseLookupConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
    • org.apache.ctakes.dictionary.lookup.ae.AssertionCuePhraseConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
    • org.apache.ctakes.dictionary.lookup.ae.NamedEntityLookupConsumerImpl
    • org.apache.ctakes.smokingstatus.lookup.ae.NonSmokerNamedEntityLookupConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
    • org.apache.ctakes.dictionary.lookup.ae.OrangeBookFilterConsumerImpl
    • org.apache.ctakes.smokingstatus.lookup.ae.SmokerNamedEntityLookupConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
    • org.apache.ctakes.dictionary.lookup.ae.UmlsToSnomedConsumerImpl
      • org.apache.ctakes.dictionary.lookup.ae.UmlsToSnomedDbConsumerImpl
      • org.apache.ctakes.dictionary.lookup.ae.UmlsToSnomedLuceneConsumerImpl
    • org.apache.ctakes.smokingstatus.lookup.ae.UnknownSmokerNamedEntityLookupConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
  • org.apache.ctakes.dictionary.lookup.ae.BaseLookupConsumerImpl.LookupHitKey
  • org.apache.ctakes.dictionary.lookup.BaseMetaDataHitImpl (implements org.apache.ctakes.dictionary.lookup.MetaDataHit)
  • org.apache.ctakes.ytex.kernel.metric.BaseSimilarityMetric (implements org.apache.ctakes.ytex.kernel.metric.SimilarityMetric)
    • org.apache.ctakes.ytex.kernel.metric.IntrinsicLCHMetric
    • org.apache.ctakes.ytex.kernel.metric.IntrinsicPathMetric
    • org.apache.ctakes.ytex.kernel.metric.IntrinsicRadaMetric
    • org.apache.ctakes.ytex.kernel.metric.JaccardMetric
    • org.apache.ctakes.ytex.kernel.metric.LCHMetric
    • org.apache.ctakes.ytex.kernel.metric.LinMetric
    • org.apache.ctakes.ytex.kernel.metric.PageRankMetric
    • org.apache.ctakes.ytex.kernel.metric.PathMetric
    • org.apache.ctakes.ytex.kernel.metric.RadaMetric
    • org.apache.ctakes.ytex.kernel.metric.SokalSneathMetric
    • org.apache.ctakes.ytex.kernel.metric.WuPalmerMetric
  • org.apache.ctakes.ytex.kernel.BaseSparseDataFormatter (implements org.apache.ctakes.ytex.kernel.SparseDataFormatter)
    • org.apache.ctakes.ytex.libsvm.LibSVMFormatterFactory.LibSVMFormatter
      • org.apache.ctakes.ytex.sparsematrix.SparseMatrixFormatterFactory.SparseMatrixDataFormatter
      • org.apache.ctakes.ytex.svmlight.SVMLightFormatterFactory.SVMLightFormatter
        • org.apache.ctakes.ytex.semil.SemiLFormatterFactory.SemiLDataFormatter
          • org.apache.ctakes.ytex.svmlight.SGTFormatterFactory.SGTFormatter
          • org.apache.ctakes.ytex.kernel.SVMLinFormatterFactory.SVMLinDataFormatter
    • org.apache.ctakes.ytex.weka.WekaFormatterFactory.WekaFormatter
      • org.apache.ctakes.ytex.weka.WekaAttributeEvaluatorImpl.WekaAttributeEvaluatorFormatter
  • org.apache.ctakes.typesystem.type.syntax.BaseToken
  • org.apache.ctakes.typesystem.type.syntax.BaseToken
  • org.apache.ctakes.typesystem.type.syntax.BaseToken
  • org.apache.ctakes.typesystem.type.syntax.BaseToken_Type
  • org.apache.ctakes.typesystem.type.syntax.BaseToken_Type
  • org.apache.ctakes.typesystem.type.syntax.BaseToken_Type
  • org.apache.ctakes.core.fsm.adapters.BaseTokenAdapter (implements org.apache.ctakes.core.fsm.token.BaseToken)
    • org.apache.ctakes.core.fsm.adapters.CharacterTokenAdapter (implements org.apache.ctakes.core.fsm.token.CharacterToken)
      • org.apache.ctakes.core.fsm.adapters.NewlineTokenAdapter (implements org.apache.ctakes.core.fsm.token.EolToken)
      • org.apache.ctakes.core.fsm.adapters.PunctuationTokenAdapter (implements org.apache.ctakes.core.fsm.token.PunctuationToken)
      • org.apache.ctakes.core.fsm.adapters.SymbolTokenAdapter (implements org.apache.ctakes.core.fsm.token.SymbolToken)
    • org.apache.ctakes.core.fsm.adapters.ContractionTokenAdapter (implements org.apache.ctakes.core.fsm.token.ContractionToken)
    • org.apache.ctakes.core.fsm.adapters.NumberTokenAdapter (implements org.apache.ctakes.core.fsm.token.NumberToken)
      • org.apache.ctakes.core.fsm.adapters.DecimalTokenAdapter (implements org.apache.ctakes.core.fsm.token.DecimalToken)
      • org.apache.ctakes.core.fsm.adapters.IntegerTokenAdapter (implements org.apache.ctakes.core.fsm.token.IntegerToken)
    • org.apache.ctakes.core.fsm.adapters.TextTokenAdapter (implements org.apache.ctakes.core.fsm.token.TextToken)
      • org.apache.ctakes.core.fsm.adapters.WordTokenAdapter (implements org.apache.ctakes.core.fsm.token.WordToken)
  • org.apache.ctakes.core.fsm.token.adapter.BaseTokenAdapter (implements org.apache.ctakes.core.fsm.token.BaseToken)
    • org.apache.ctakes.core.fsm.token.adapter.CharacterTokenAdapter (implements org.apache.ctakes.core.fsm.token.CharacterToken)
      • org.apache.ctakes.core.fsm.token.adapter.PunctuationTokenAdapter (implements org.apache.ctakes.core.fsm.token.PunctuationToken)
    • org.apache.ctakes.core.fsm.token.adapter.NumberTokenAdapter (implements org.apache.ctakes.core.fsm.token.NumberToken)
      • org.apache.ctakes.core.fsm.token.adapter.DecimalTokenAdapter (implements org.apache.ctakes.core.fsm.token.DecimalToken)
      • org.apache.ctakes.core.fsm.token.adapter.IntegerTokenAdapter (implements org.apache.ctakes.core.fsm.token.IntegerToken)
    • org.apache.ctakes.core.fsm.token.adapter.WordTokenAdapter (implements org.apache.ctakes.core.fsm.token.WordToken)
  • org.apache.ctakes.core.fsm.output.BaseTokenImpl (implements org.apache.ctakes.core.fsm.token.BaseToken)
    • org.apache.ctakes.necontexts.ContextHit
    • org.apache.ctakes.core.fsm.output.DateToken
    • org.apache.ctakes.core.fsm.output.FractionToken
    • org.apache.ctakes.core.fsm.output.MeasurementToken
    • org.apache.ctakes.core.fsm.output.NegationIndicator
    • org.apache.ctakes.drugner.fsm.output.util.NonIndicator
    • org.apache.ctakes.core.fsm.output.PersonTitleToken
    • org.apache.ctakes.core.fsm.output.RangeToken
    • org.apache.ctakes.core.fsm.output.RomanNumeralToken
    • org.apache.ctakes.core.fsm.output.StatusIndicator
    • org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator
    • org.apache.ctakes.core.fsm.output.TimeToken
  • org.apache.ctakes.drugner.fsm.output.elements.BaseTokenImpl (implements org.apache.ctakes.core.fsm.token.BaseToken)
    • org.apache.ctakes.drugner.fsm.output.elements.AssociatedCodeToken
    • org.apache.ctakes.drugner.fsm.output.elements.ConfidenceScoreToken
    • org.apache.ctakes.drugner.fsm.output.util.DecimalStrengthToken
    • org.apache.ctakes.drugner.fsm.output.elements.DosageToken
    • org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken
    • org.apache.ctakes.drugner.fsm.output.elements.DurationToken
    • org.apache.ctakes.drugner.fsm.output.elements.FormToken
    • org.apache.ctakes.drugner.fsm.output.util.FractionStrengthToken
    • org.apache.ctakes.drugner.fsm.output.util.FractionToken
    • org.apache.ctakes.drugner.fsm.output.elements.FrequencyToken
    • org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken
    • org.apache.ctakes.drugner.fsm.output.util.HyphenatedDrugToken
    • org.apache.ctakes.drugner.fsm.output.util.RangeStrengthToken
    • org.apache.ctakes.drugner.fsm.output.util.RangeToken
    • org.apache.ctakes.drugner.fsm.output.elements.RouteToken
    • org.apache.ctakes.drugner.fsm.output.elements.StrengthToken
    • org.apache.ctakes.drugner.fsm.output.elements.StrengthUnitCombinedToken
    • org.apache.ctakes.drugner.fsm.output.elements.StrengthUnitToken
    • org.apache.ctakes.drugner.fsm.output.util.SuffixFrequencyToken
    • org.apache.ctakes.drugner.fsm.output.util.SuffixStrengthToken
  • org.apache.ctakes.assertion.stub.BatchRunner
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation_Type
  • org.apache.ctakes.gui.pipeline.bit.BitCellRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality_Type
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality_Type
  • org.apache.ctakes.typesystem.type.refsem.BodyLaterality_Type
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.BodySide
  • org.apache.ctakes.typesystem.type.refsem.BodySide
  • org.apache.ctakes.typesystem.type.refsem.BodySide
  • org.apache.ctakes.typesystem.type.refsem.BodySide_Type
  • org.apache.ctakes.typesystem.type.refsem.BodySide_Type
  • org.apache.ctakes.typesystem.type.refsem.BodySide_Type
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.BodySideModifier_Type
  • org.apache.ctakes.ytex.uima.model.BooleanUtil
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.BrownClusterFeatureFunction (implements org.cleartk.ml.feature.function.FeatureFunction)
  • org.apache.ctakes.dictionary.lookup2.concept.BsvConceptFactory (implements org.apache.ctakes.dictionary.lookup2.concept.ConceptFactory)
  • org.apache.ctakes.dictionary.lookup2.concept.BsvConceptFactory.CuiTuiTerm
  • org.apache.ctakes.dictionary.lookup2.dictionary.BsvRareWordDictionary (implements org.apache.ctakes.dictionary.lookup2.dictionary.RareWordDictionary)
  • org.apache.ctakes.ytex.kernel.evaluator.CacheKernel (implements org.springframework.beans.factory.InitializingBean, org.apache.ctakes.ytex.kernel.evaluator.Kernel)
    • org.apache.ctakes.ytex.kernel.evaluator.ProductKernel
    • org.apache.ctakes.ytex.kernel.evaluator.SemanticSimKernel (implements org.springframework.beans.factory.InitializingBean)
      • org.apache.ctakes.ytex.kernel.evaluator.LinKernel (implements org.springframework.beans.factory.InitializingBean)
    • org.apache.ctakes.ytex.kernel.evaluator.SemanticTypeKernel
    • org.apache.ctakes.ytex.kernel.evaluator.SumKernel
  • org.apache.ctakes.core.cc.CASConsumerTestDriver
  • org.apache.ctakes.assertion.medfacts.CasIndexer<T>
  • org.apache.ctakes.relationextractor.data.CategoricalDistribution
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout_Type
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout_Type
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout_Type
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation_Type
  • org.apache.ctakes.assertion.medfacts.i2b2.api.CharacterOffsetToLineTokenConverterCtakesImpl (implements org.apache.ctakes.assertion.stub.CharacterOffsetToLineTokenConverter)
  • org.apache.ctakes.assertion.stub.CharacterOffsetToLineTokenConverterDefaultImpl
  • org.apache.ctakes.temporal.utils.CheckKnowtatorAnnotations
  • org.apache.ctakes.temporal.ae.feature.CheckSpecialWordRelationExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.syntax.Chunk
  • org.apache.ctakes.typesystem.type.syntax.Chunk
  • org.apache.ctakes.typesystem.type.syntax.Chunk
  • org.apache.ctakes.typesystem.type.syntax.Chunk_Type
  • org.apache.ctakes.typesystem.type.syntax.Chunk_Type
  • org.apache.ctakes.typesystem.type.syntax.Chunk_Type
  • org.apache.ctakes.temporal.ae.feature.ChunkingExtractor
  • org.apache.ctakes.smokingstatus.util.ClassifiableEntry
  • org.apache.ctakes.ytex.kernel.model.ClassifierEvaluation (implements java.io.Serializable)
    • org.apache.ctakes.ytex.kernel.model.SemiLClassifierEvaluation
    • org.apache.ctakes.ytex.kernel.model.SVMClassifierEvaluation
  • org.apache.ctakes.ytex.kernel.dao.ClassifierEvaluationDaoImpl (implements org.apache.ctakes.ytex.kernel.dao.ClassifierEvaluationDao)
  • org.apache.ctakes.ytex.kernel.ClassifierEvaluationImporter
  • org.apache.ctakes.ytex.kernel.model.ClassifierEvaluationIRStat (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.ClassifierEvaluationResult
  • org.apache.ctakes.ytex.kernel.ClassifierEvaluationResults
  • org.apache.ctakes.ytex.kernel.ClassifierEvalUtil
  • org.apache.ctakes.ytex.kernel.model.ClassifierInstanceEvaluation (implements java.io.Serializable)
  • org.cleartk.ml.feature.extractor.CleartkExtractor.Following
    • org.apache.ctakes.core.cleartk.FollowingWithPadding
  • org.cleartk.ml.feature.extractor.CleartkExtractor.Preceding
    • org.apache.ctakes.core.cleartk.PrecedingWithPadding
  • org.apache.ctakes.coreference.ae.features.salience.ClinicalFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.clinicalpipeline.ClinicalPipelineFactory
  • org.apache.ctakes.clinicalpipeline.ClinicalPipelineWithUmls
  • org.apache.ctakes.core.pipeline.CliOptionalsHandler
  • org.apache.ctakes.temporal.ae.feature.ClosestVerbExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.coreference.ae.pairing.cluster.ClusterMentionPairer_ImplBase (implements org.apache.ctakes.coreference.ae.pairing.AnnotationPairer<MENTION_TYPE,PAIR_TYPE>)
    • org.apache.ctakes.coreference.ae.pairing.cluster.ClusterPairer
    • org.apache.ctakes.coreference.ae.pairing.cluster.ExactStringPairer
    • org.apache.ctakes.coreference.ae.pairing.cluster.HeadwordPairer
    • org.apache.ctakes.coreference.ae.pairing.cluster.SectionHeaderPairer
    • org.apache.ctakes.coreference.ae.pairing.cluster.SentenceDistancePairer
  • org.apache.ctakes.coreference.util.ClusterUtils
  • org.apache.ctakes.core.cpe.CmdLineCpeRunner
  • org.apache.ctakes.core.util.collection.CollectionCreatorFactory
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation_Type
  • org.apache.ctakes.gui.util.ColorFactory
  • org.apache.ctakes.jdl.schema.xdl.ColumnCsvLoadType
    • org.apache.ctakes.jdl.schema.xdl.CsvLoadType.Column
  • org.apache.ctakes.ytex.uima.mapper.ColumnMappingInfo
  • org.apache.ctakes.jdl.schema.xdl.ColumnXmlLoadType
    • org.apache.ctakes.jdl.schema.xdl.XmlLoadType.Column
  • org.apache.ctakes.temporal.eval.CommandLine
  • org.apache.ctakes.temporal.eval.CommandLine.IntegerRanges
  • org.apache.ctakes.constituency.parser.util.CommandLineParserUtil
  • org.apache.ctakes.utils.xcas_comparison.Compare
  • org.apache.ctakes.temporal.data.analysis.CompareFeatureStructures
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts_Type
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts_Type
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts_Type
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation_Type
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • org.apache.ctakes.gui.component.CellRendererLabel
        • javax.swing.JList<E> (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • org.apache.ctakes.gui.component.SmoothTipList<T>
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • org.apache.ctakes.gui.pipeline.bit.BitInfoPanel
            • org.apache.ctakes.gui.pipeline.bit.info.PipeBitInfoPanel
            • org.apache.ctakes.gui.pipeline.bit.user.UserBitInfoPanel
          • org.apache.ctakes.gui.component.CellRendererPanel
          • org.apache.ctakes.gui.component.DisablerPane (implements java.awt.event.FocusListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener)
          • org.apache.ctakes.gui.component.FileChooserPanel
          • org.apache.ctakes.gui.pipeline.bit.parameter.ParameterInfoPanel
            • org.apache.ctakes.gui.pipeline.bit.user.UserParameterInfoPanel
          • org.apache.ctakes.gui.component.TextLineNumber (implements javax.swing.event.CaretListener, javax.swing.event.DocumentListener, java.beans.PropertyChangeListener)
        • javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
          • org.apache.ctakes.gui.component.LoggerPanel
          • org.apache.ctakes.gui.component.SystemOutPanel
        • javax.swing.JSplitPane (implements javax.accessibility.Accessible)
          • org.apache.ctakes.gui.component.PositionedSplitPane
        • javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.event.RowSorterListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
          • org.apache.ctakes.gui.component.SmoothTipTable
        • javax.swing.JToolTip (implements javax.accessibility.Accessible)
          • org.apache.ctakes.gui.component.SmoothToolTip
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • org.apache.ctakes.ytex.tools.docanalyzer.DBAnnotationViewerDialog (implements java.awt.event.ActionListener)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • org.apache.ctakes.ytex.tools.DBAnnotationViewerMain
  • org.apache.ctakes.gui.dictionary.umls.Concept
  • org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl (implements org.apache.ctakes.ytex.kernel.dao.ConceptDao)
  • org.apache.ctakes.ytex.web.search.ConceptFirstWord (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.model.ConceptGraph (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.metric.ConceptInfo
  • org.apache.ctakes.assertion.medfacts.ConceptLookup
  • org.apache.ctakes.ytex.web.search.ConceptLookupBean (implements java.io.Serializable)
  • org.apache.ctakes.gui.dictionary.umls.ConceptMapFactory
  • org.apache.ctakes.ytex.kernel.metric.ConceptPair (implements java.lang.Comparable<T>, java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.metric.ConceptPairSimilarity (implements java.io.Serializable)
  • org.apache.ctakes.ytex.web.search.ConceptSearchServiceImpl (implements org.apache.ctakes.ytex.web.search.ConceptSearchService, org.springframework.beans.factory.InitializingBean)
  • org.apache.ctakes.ytex.web.search.ConceptSearchServiceImpl.ConceptFirstWordRowMapper (implements org.springframework.jdbc.core.RowMapper<T>)
  • org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl (implements org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityService)
  • org.apache.ctakes.ytex.ws.ConceptSimilarityWebServiceImpl (implements org.apache.ctakes.ytex.ws.ConceptSimilarityRestService, org.apache.ctakes.ytex.ws.ConceptSimilarityWebService)
  • org.apache.ctakes.assertion.stub.ConceptType
  • org.apache.ctakes.ytex.kernel.model.ConcRel (implements java.io.Serializable)
  • net.openai.util.fsm.Condition (implements java.io.Serializable)
    • org.apache.ctakes.core.fsm.condition.CombineCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.ContainsSetTextValueCondition
    • org.apache.ctakes.core.fsm.condition.DayNightWordCondition
    • org.apache.ctakes.core.fsm.condition.DecimalCondition
    • org.apache.ctakes.core.fsm.condition.DecimalRangeCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.DecimalStrengthStatusCondition
    • org.apache.ctakes.core.fsm.condition.DecimalValueCondition
    • org.apache.ctakes.core.fsm.condition.DisjoinCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.DosageCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.DrugChangeStatusCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.FormCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.FractionCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.FractionStrengthCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.FrequencyUnitCondition
    • org.apache.ctakes.core.fsm.condition.HourMinuteCondition
    • org.apache.ctakes.core.fsm.condition.IntegerCondition
    • org.apache.ctakes.core.fsm.condition.IntegerRangeCondition
    • org.apache.ctakes.core.fsm.condition.IntegerValueCondition
    • org.apache.ctakes.core.fsm.condition.NegateCondition
    • org.apache.ctakes.core.fsm.condition.NumberCondition
    • org.apache.ctakes.core.fsm.condition.PunctuationValueCondition
    • org.apache.ctakes.core.fsm.condition.RangeCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.RangeDosageCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.RangeStrengthCondition
    • org.apache.ctakes.core.fsm.condition.RomanNumeralCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.RouteCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.StrengthCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCombinedCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCondition
    • org.apache.ctakes.core.fsm.condition.SymbolValueCondition
    • org.apache.ctakes.core.fsm.condition.TextSetCondition
    • org.apache.ctakes.core.fsm.condition.TextValueCondition
    • org.apache.ctakes.drugner.fsm.elements.conditions.TimeCondition
    • org.apache.ctakes.core.fsm.condition.WordSetCondition
    • org.apache.ctakes.core.fsm.condition.WordValueCondition
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier_Type
  • org.apache.ctakes.drugner.elements.ConfidenceScoreElement
  • org.apache.ctakes.core.config.ConfigParameterConstants
  • org.apache.ctakes.typesystem.type.syntax.CONJP
  • org.apache.ctakes.typesystem.type.syntax.CONJP
  • org.apache.ctakes.typesystem.type.syntax.CONJP
  • org.apache.ctakes.typesystem.type.syntax.CONJP_Type
  • org.apache.ctakes.typesystem.type.syntax.CONJP_Type
  • org.apache.ctakes.typesystem.type.syntax.CONJP_Type
  • org.apache.ctakes.temporal.ae.feature.ConjunctionRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode_Type
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode_Type
  • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode_Type
  • org.apache.ctakes.jdl.schema.xdl.ConnType
  • org.apache.ctakes.utils.xcas_comparison.Const
  • org.apache.ctakes.typesystem.type.constants.CONST
  • org.apache.ctakes.relationextractor.data.Constants
  • org.apache.ctakes.assertion.medfacts.i2b2.api.ConstraintConstructor
    • org.apache.ctakes.assertion.medfacts.i2b2.api.ConstraintConstructorFindContainedBy
    • org.apache.ctakes.assertion.medfacts.i2b2.api.ConstraintConstructorFindContainedWithin
  • org.apache.ctakes.necontexts.ContextAnalyzerAdapter (implements org.apache.ctakes.necontexts.ContextAnalyzer)
    • org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation_Type
  • org.apache.ctakes.necontexts.ContextHitConsumerAdapter (implements org.apache.ctakes.necontexts.ContextHitConsumer)
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.ContextWordWindowExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.coreference.extractors.ContinuousBag (implements org.cleartk.ml.feature.extractor.CleartkExtractor.Context)
  • org.apache.ctakes.coreference.extractors.ContinuousBag.Surrounding (implements org.cleartk.ml.feature.extractor.CleartkExtractor.Context)
  • org.apache.ctakes.core.cleartk.ContinuousTextExtractor (implements org.cleartk.ml.feature.extractor.NamedFeatureExtractor1<T>)
  • org.apache.ctakes.coreference.extractors.ContinuousTextExtractor (implements org.cleartk.ml.feature.extractor.NamedFeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.ContinuousTextExtractor (implements org.cleartk.ml.feature.extractor.NamedFeatureExtractor1<T>)
  • org.apache.ctakes.core.nlp.tokenizer.ContractionResult
  • org.apache.ctakes.core.nlp.tokenizer.ContractionsPTB
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken_Type
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken_Type
  • org.apache.ctakes.typesystem.type.syntax.ContractionToken_Type
  • org.apache.ctakes.typesystem.type.relation.Contraindicates
  • org.apache.ctakes.typesystem.type.relation.Contraindicates
  • org.apache.ctakes.typesystem.type.relation.Contraindicates
  • org.apache.ctakes.typesystem.type.relation.Contraindicates_Type
  • org.apache.ctakes.typesystem.type.relation.Contraindicates_Type
  • org.apache.ctakes.typesystem.type.relation.Contraindicates_Type
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation_Type
  • org.apache.ctakes.utils.xcas_comparison.ConvertAndCompare
  • org.apache.ctakes.assertion.medfacts.Converti2b2AnnotationsToCTAKES
  • org.apache.ctakes.assertion.medfacts.ConvertXMIAssertionsToi2b2Format
  • org.apache.ctakes.ytex.kernel.evaluator.ConvolutionKernel (implements org.apache.ctakes.ytex.kernel.evaluator.Kernel)
    • org.apache.ctakes.ytex.kernel.evaluator.NamedEntityNegationKernel
  • org.apache.ctakes.temporal.ae.feature.CoordinateFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.util.CorefConsts
  • org.apache.ctakes.coreference.factory.CoreferenceAnnotatorFactory
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation_Type
  • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation_Type
  • org.apache.ctakes.coreference.ae.features.CorefSyntaxFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.ytex.kernel.evaluator.CorpusKernelEvaluatorImpl (implements org.apache.ctakes.ytex.kernel.evaluator.CorpusKernelEvaluator)
  • org.apache.ctakes.ytex.kernel.evaluator.CorpusKernelEvaluatorImpl.InstanceIDRowMapper (implements org.springframework.jdbc.core.RowMapper<T>)
  • org.apache.ctakes.ytex.kernel.evaluator.CorpusKernelEvaluatorImpl.SliceEvaluator (implements java.util.concurrent.Callable<V>)
  • org.apache.ctakes.utils.struct.CounterTreeMap<K>
  • org.apache.ctakes.typesystem.type.refsem.Course
  • org.apache.ctakes.typesystem.type.refsem.Course
  • org.apache.ctakes.typesystem.type.refsem.Course
  • org.apache.ctakes.typesystem.type.refsem.Course_Type
  • org.apache.ctakes.typesystem.type.refsem.Course_Type
  • org.apache.ctakes.typesystem.type.refsem.Course_Type
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.CourseModifier_Type
  • org.apache.ctakes.temporal.ae.feature.CoveredTextToValuesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.assertion.medfacts.cleartk.CreateAssertionDescriptor
  • org.apache.ctakes.dictionary.assertion.CreateAssertionLuceneIndexFromDelimitedFile
  • org.mitre.medfacts.uima.CreateAssertionZonerDescriptors
  • org.mitre.medfacts.uima.CreateZonerDescriptor
  • org.apache.ctakes.assertion.train.CrossValidateAttributeModels
  • org.apache.ctakes.assertion.train.CrossValidateChi2GridSearch
  • org.apache.ctakes.ytex.kernel.model.CrossValidationFold (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.model.CrossValidationFoldInstance (implements java.io.Serializable)
  • org.apache.ctakes.jdl.schema.xdl.CsvLoadType
    • org.apache.ctakes.jdl.schema.xdl.LoadType.Csv
  • org.apache.ctakes.core.util.CtakesFileNamer (implements org.apache.uima.fit.factory.initializable.Initializable)
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.CueWordTest
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.CueWordTest2
  • org.apache.ctakes.ytex.kernel.CytoscapeHelperImpl (implements org.apache.ctakes.ytex.kernel.CytoscapeHelper)
  • org.apache.ctakes.typesystem.type.refsem.Date
  • org.apache.ctakes.typesystem.type.refsem.Date
  • org.apache.ctakes.typesystem.type.refsem.Date
  • org.apache.ctakes.typesystem.type.refsem.Date_Type
  • org.apache.ctakes.typesystem.type.refsem.Date_Type
  • org.apache.ctakes.typesystem.type.refsem.Date_Type
  • org.apache.ctakes.temporal.ae.feature.DateAndMeasurementExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.DateAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.DateFSM
  • org.apache.ctakes.core.util.DateParser
  • org.apache.ctakes.ytex.tools.DBPing
  • org.apache.ctakes.ytex.dao.DBUtil
  • org.apache.ctakes.dictionary.lookup.ae.DebugConsumerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupConsumer)
  • org.apache.ctakes.drugner.fsm.machines.elements.DecimalStrengthFSM
  • org.apache.ctakes.chunker.ae.DefaultChunkCreator (implements org.apache.ctakes.chunker.ae.ChunkCreator)
  • org.apache.ctakes.core.util.collection.DefaultCollectionMap<K,V,T> (implements org.apache.ctakes.core.util.collection.CollectionMap<K,V,T>)
  • org.apache.ctakes.dictionary.lookup2.concept.DefaultConcept (implements org.apache.ctakes.dictionary.lookup2.concept.Concept)
  • org.apache.ctakes.dictionary.lookup2.util.DefaultDictionarySpec (implements org.apache.ctakes.dictionary.lookup2.util.DictionarySpec)
  • org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • org.apache.ctakes.preprocessor.ClinicalNotePreProcessor (implements org.apache.ctakes.preprocessor.PreProcessor)
    • org.apache.ctakes.jdl.data.xml.SaxParser
    • org.apache.ctakes.utils.xcas_comparison.XcasProcessor
  • org.apache.ctakes.core.cc.pretty.row.DefaultItemRow (implements org.apache.ctakes.core.cc.pretty.row.ItemRow)
  • org.apache.ctakes.gui.pipeline.bit.parameter.DefaultParameterHolder (implements org.apache.ctakes.gui.pipeline.bit.parameter.ParameterHolder)
  • org.apache.ctakes.core.cc.pretty.textspan.DefaultTextSpan (implements org.apache.ctakes.core.cc.pretty.textspan.TextSpan)
  • org.apache.ctakes.dictionary.lookup2.textspan.DefaultTextSpan (implements org.apache.ctakes.dictionary.lookup2.textspan.TextSpan)
  • org.apache.ctakes.dictionary.lookup2.consumer.DefaultUmlsConceptCreator (implements org.apache.ctakes.dictionary.lookup2.consumer.UmlsConceptCreator)
  • org.apache.ctakes.gui.pipeline.bit.user.DefaultUserBit (implements org.apache.ctakes.gui.pipeline.bit.user.UserBit)
  • org.apache.ctakes.typesystem.type.relation.DegreeOf
  • org.apache.ctakes.typesystem.type.relation.DegreeOf
  • org.apache.ctakes.typesystem.type.relation.DegreeOf
  • org.apache.ctakes.typesystem.type.relation.DegreeOf_Type
  • org.apache.ctakes.typesystem.type.relation.DegreeOf_Type
  • org.apache.ctakes.typesystem.type.relation.DegreeOf_Type
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation_Type
  • org.apache.ctakes.dependency.parser.util.Delim
  • org.apache.ctakes.typesystem.type.structured.Demographics
  • org.apache.ctakes.typesystem.type.structured.Demographics
  • org.apache.ctakes.typesystem.type.structured.Demographics
  • org.apache.ctakes.typesystem.type.structured.Demographics_Type
  • org.apache.ctakes.typesystem.type.structured.Demographics_Type
  • org.apache.ctakes.typesystem.type.structured.Demographics_Type
  • org.apache.ctakes.temporal.ae.feature.DependencyFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.relationextractor.ae.features.DependencyParseUtils
  • org.apache.ctakes.temporal.ae.feature.DependencyParseUtils
  • org.apache.ctakes.relationextractor.ae.features.DependencyPathFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.DependencyPathFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.DependencyPathRegexpFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.dependency.parser.util.DependencyRegex
  • org.apache.ctakes.temporal.ae.feature.treekernel.DependencySingleTreeExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.relationextractor.ae.features.DependencyTreeFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.dependency.parser.util.DependencyUtility
    • org.apache.ctakes.dependency.parser.util.ClearDependencyUtility
  • org.apache.ctakes.temporal.ae.feature.DependingVerbsFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.DeterminerRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.relation.Diagnoses
  • org.apache.ctakes.typesystem.type.relation.Diagnoses
  • org.apache.ctakes.typesystem.type.relation.Diagnoses
  • org.apache.ctakes.typesystem.type.relation.Diagnoses_Type
  • org.apache.ctakes.typesystem.type.relation.Diagnoses_Type
  • org.apache.ctakes.typesystem.type.relation.Diagnoses_Type
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation_Type
  • org.apache.ctakes.gui.dictionary.DictionaryCreator
  • org.apache.ctakes.dictionary.lookup2.dictionary.DictionaryDescriptorParser
  • org.apache.ctakes.dictionary.lookup.DictionaryEngine
  • org.apache.ctakes.dictionary.lookup2.ae.DictionaryLookupFactory
  • org.apache.ctakes.dictionary.lookup.ae.DirectLookupInitializerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupInitializer)
  • org.cleartk.ml.jar.DirectoryDataWriter<CLASSIFIER_BUILDER,CLASSIFIER_TYPE>
    • org.cleartk.ml.jar.EncodingDirectoryDataWriter<CLASSIFIER_BUILDER_TYPE,CLASSIFIER_TYPE,ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE>
      • org.cleartk.ml.jar.DataWriter_ImplBase<CLASSIFIER_BUILDER_TYPE,ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE> (implements org.cleartk.ml.DataWriter<OUTCOME_TYPE>)
        • org.cleartk.ml.liblinear.GenericLibLinearDataWriter<CLASSIFIER_BUILDER_TYPE,OUTCOME_TYPE>
          • org.cleartk.ml.liblinear.LibLinearStringOutcomeDataWriter
            • org.apache.ctakes.assertion.medfacts.cleartk.EncoderReusingDataWriter
        • org.apache.ctakes.temporal.keras.ScriptStringFeatureDataWriter<T> (implements org.apache.uima.fit.factory.initializable.Initializable)
          • org.apache.ctakes.temporal.keras.KerasStringOutcomeDataWriter
        • org.apache.ctakes.temporal.keras.ScriptStringOutcomeDataWriter<T> (implements org.apache.uima.fit.factory.initializable.Initializable)
          • org.apache.ctakes.temporal.keras.KerasStringFeatureDataWriter
  • org.apache.ctakes.dictionary.lookup.algorithms.DirectPassThroughImpl (implements org.apache.ctakes.dictionary.lookup.algorithms.LookupAlgorithm)
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder_Type
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder_Type
  • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder_Type
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention_Type
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention_Type
  • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention_Type
  • org.apache.ctakes.coreference.ae.features.DistanceFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.utils.distsem.DistanceMetrics
  • org.apache.ctakes.coreference.ae.features.DistSemFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.DocTimeRelFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.ytex.uima.model.Document (implements java.io.Serializable)
  • org.apache.ctakes.ytex.uima.model.DocumentAnnotation (implements java.io.Serializable)
  • org.apache.ctakes.ytex.uima.model.DocumentClass (implements java.io.Serializable)
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentClassification_Type
  • org.apache.ctakes.ytex.uima.dao.DocumentDaoImpl (implements org.apache.ctakes.ytex.uima.dao.DocumentDao)
  • javax.swing.text.DocumentFilter
    • org.apache.ctakes.gui.pipeline.piper.PiperTextFilter
  • org.apache.ctakes.typesystem.type.structured.DocumentID
  • org.apache.ctakes.typesystem.type.structured.DocumentID
  • org.apache.ctakes.typesystem.type.structured.DocumentID
  • org.apache.ctakes.typesystem.type.structured.DocumentID_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentID_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentID_Type
  • org.apache.ctakes.core.util.DocumentIDAnnotationUtil
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix_Type
  • org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl (implements org.apache.ctakes.ytex.uima.mapper.DocumentMapperService, org.springframework.beans.factory.InitializingBean)
  • org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl.AnnoFSAttribute
  • org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl.AnnoLink
  • org.apache.ctakes.preprocessor.DocumentMetaData
  • org.apache.ctakes.typesystem.type.structured.DocumentPath
  • org.apache.ctakes.typesystem.type.structured.DocumentPath
  • org.apache.ctakes.typesystem.type.structured.DocumentPath
  • org.apache.ctakes.typesystem.type.structured.DocumentPath_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentPath_Type
  • org.apache.ctakes.typesystem.type.structured.DocumentPath_Type
  • org.apache.ctakes.ytex.weka.DocumentResultInstanceImporter (implements org.apache.ctakes.ytex.weka.WekaResultInstanceImporter)
  • org.apache.ctakes.ytex.web.search.DocumentSearchResult (implements java.io.Serializable)
  • org.apache.ctakes.ytex.web.search.DocumentSearchServiceImpl (implements org.apache.ctakes.ytex.web.search.DocumentSearchService, org.springframework.beans.factory.InitializingBean)
  • org.apache.ctakes.ytex.web.search.DocumentSearchServiceImpl.DocumentSearchResultMapper (implements org.springframework.jdbc.core.RowMapper<T>)
  • org.apache.ctakes.core.util.DocumentSection
  • org.apache.ctakes.ytex.web.search.DocumentViewBean (implements java.io.Serializable)
  • org.apache.ctakes.jdl.data.xml.DomParser
  • org.apache.ctakes.jdl.data.xml.DomUtil
  • org.apache.ctakes.drugner.elements.DosageElement
  • org.apache.ctakes.drugner.fsm.machines.elements.DosagesFSM
  • org.apache.ctakes.gui.dictionary.umls.DoseUtil
  • org.apache.ctakes.core.util.DotLogger (implements java.io.Closeable)
  • org.apache.ctakes.drugner.elements.DrugChangeStatusElement
  • org.apache.ctakes.drugner.fsm.machines.elements.DrugChangeStatusFSM
  • org.apache.ctakes.drugner.DrugMention (implements org.apache.ctakes.drugner.DrugModel)
  • org.apache.ctakes.preprocessor.DTDloader (implements org.xml.sax.EntityResolver)
  • org.apache.ctakes.temporal.nn.data.DtrRelPrinter
  • org.apache.ctakes.temporal.ae.feature.duration.DurationDistributionFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.drugner.elements.DurationElement
  • org.apache.ctakes.temporal.ae.feature.duration.DurationEventEventFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.duration.DurationEventTimeFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.duration.DurationExpectationFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.drugner.fsm.machines.elements.DurationFSM
  • org.apache.ctakes.temporal.ae.feature.duration.DurationTimeUnitFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.util.EditDistance
  • org.apache.ctakes.typesystem.type.refsem.Element
  • org.apache.ctakes.typesystem.type.refsem.Element
  • org.apache.ctakes.typesystem.type.refsem.Element
  • org.apache.ctakes.typesystem.type.refsem.Element_Type
  • org.apache.ctakes.typesystem.type.refsem.Element_Type
  • org.apache.ctakes.typesystem.type.refsem.Element_Type
  • org.apache.ctakes.typesystem.type.relation.ElementRelation
  • org.apache.ctakes.typesystem.type.relation.ElementRelation
  • org.apache.ctakes.typesystem.type.relation.ElementRelation
  • org.apache.ctakes.typesystem.type.relation.ElementRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ElementRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ElementRelation_Type
  • org.apache.ctakes.relationextractor.ae.features.EmbeddingFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.EmptyFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.cleartk.ml.jar.EncodingJarClassifier<ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE>
    • org.cleartk.ml.jar.Classifier_ImplBase<ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE> (implements org.cleartk.ml.Classifier<OUTCOME_TYPE>)
      • org.apache.ctakes.temporal.keras.ScriptStringOutcomeClassifier
        • org.apache.ctakes.temporal.keras.KerasStringOutcomeClassifier
  • org.apache.ctakes.core.sentence.EndOfSentenceScannerImpl (implements opennlp.tools.sentdetect.EndOfSentenceScanner)
  • org.apache.ctakes.typesystem.type.refsem.Entity
  • org.apache.ctakes.typesystem.type.refsem.Entity
  • org.apache.ctakes.typesystem.type.refsem.Entity
  • org.apache.ctakes.typesystem.type.refsem.Entity_Type
  • org.apache.ctakes.typesystem.type.refsem.Entity_Type
  • org.apache.ctakes.typesystem.type.refsem.Entity_Type
  • org.apache.ctakes.core.pipeline.EntityCollector.Entity
  • org.apache.ctakes.typesystem.type.textsem.EntityMention
  • org.apache.ctakes.typesystem.type.textsem.EntityMention
  • org.apache.ctakes.typesystem.type.textsem.EntityMention
  • org.apache.ctakes.typesystem.type.textsem.EntityMention_Type
  • org.apache.ctakes.typesystem.type.textsem.EntityMention_Type
  • org.apache.ctakes.typesystem.type.textsem.EntityMention_Type
  • org.apache.ctakes.relationextractor.ae.features.EntitySpanFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.core.util.collection.EnumSetMap<K,V> (implements org.apache.ctakes.core.util.collection.CollectionMap<K,V,T>)
  • org.apache.ctakes.utils.env.EnvironmentVariable
  • org.apache.ctakes.ytex.kernel.evaluator.EqualityKernel (implements org.apache.ctakes.ytex.kernel.evaluator.Kernel)
  • org.cleartk.eval.Evaluation_ImplBase<ITEM_TYPE,STATS_TYPE>
    • org.apache.ctakes.assertion.eval.AssertionEvaluation
    • org.apache.ctakes.temporal.eval.Evaluation_ImplBase<STATISTICS_TYPE>
      • org.apache.ctakes.temporal.eval.EvaluationOfAnnotationSpans_ImplBase
        • org.apache.ctakes.temporal.eval.EvaluationOfClearTKEventSpans
        • org.apache.ctakes.temporal.eval.EvaluationOfClearTKTimeSpans
        • org.apache.ctakes.temporal.eval.EvaluationOfEventSpans
        • org.apache.ctakes.temporal.eval.EvaluationOfMetaTimeExpressionExtractor
        • org.apache.ctakes.temporal.eval.EvaluationOfNEPredicateEventSpans
        • org.apache.ctakes.temporal.eval.EvaluationOfTimeSpans
      • org.apache.ctakes.temporal.eval.EvaluationOfClearTKEventProperties
      • org.apache.ctakes.temporal.eval.EvaluationOfEventDocTimeRelDeepPhe
      • org.apache.ctakes.temporal.eval.EvaluationOfEventProperties
      • org.apache.ctakes.coreference.eval.EvaluationOfMarkableSalience
      • org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations_ImplBase
        • org.apache.ctakes.temporal.eval.EvaluationOfBothEEAndETRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfClearTKRelations
        • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference
        • org.apache.ctakes.temporal.eval.EvaluationOfEventEventCRFRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventEventDeepPheRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventEventHybridModelsRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventEventRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventEventThymeRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeDeepPheRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfI2B2TemporalRelations
        • org.apache.ctakes.temporal.nn.eval.EvaluationOfNeuralEEAndETRelations
        • org.apache.ctakes.temporal.eval.EvaluationOfSelfEventTimeRelations
        • org.apache.ctakes.temporal.nn.eval.EventEventNeuralEvaluation
        • org.apache.ctakes.temporal.nn.eval.EventTimeNeuralEvaluation
        • org.apache.ctakes.temporal.eval.NeuralEventEventRelationsCNNEvaluation
        • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsCNNEvaluation
        • org.apache.ctakes.temporal.eval.NeuralEventTimeRelationsEvaluation
    • org.apache.ctakes.relationextractor.eval.SHARPXMI.Evaluation_ImplBase
      • org.apache.ctakes.relationextractor.eval.ModifierExtractorEvaluation
      • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation
  • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.AnnotationComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.temporal.eval.EvaluationOfEventTimeRelations.ParameterSettings
  • org.apache.ctakes.typesystem.type.refsem.Event
  • org.apache.ctakes.typesystem.type.refsem.Event
  • org.apache.ctakes.typesystem.type.refsem.Event
  • org.apache.ctakes.typesystem.type.refsem.Event_Type
  • org.apache.ctakes.typesystem.type.refsem.Event_Type
  • org.apache.ctakes.typesystem.type.refsem.Event_Type
  • org.apache.ctakes.relationextractor.data.analysis.EventAndEntityViewer
  • org.apache.ctakes.temporal.ae.feature.EventArgumentPropertyExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.data.analysis.EventContextAnalysisPipeline
  • org.apache.ctakes.coreference.ae.EventCoreferenceAnnotator.IdentifiedAnnotationPairComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.coreference.ae.EventCoreferenceAnnotator.MarkableConfidenceComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.coreference.ae.EventCoreferenceAnnotator.MarkablePairConfidenceComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.temporal.duration.EventDurationDistribution
  • org.apache.ctakes.temporal.duration.EventDurationDistribution.FileSizeComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.temporal.duration.EventDurationDistribution.Options
  • org.apache.ctakes.temporal.nn.data.EventEventAllPairRelPrinter
  • org.apache.ctakes.temporal.duration.EventEventDurationStatistics
  • org.apache.ctakes.temporal.nn.data.EventEventRelPositionPrinter
  • org.apache.ctakes.temporal.nn.data.EventEventRelPrinter
  • org.apache.ctakes.typesystem.type.textsem.EventMention
  • org.apache.ctakes.typesystem.type.textsem.EventMention
  • org.apache.ctakes.typesystem.type.textsem.EventMention
  • org.apache.ctakes.typesystem.type.textsem.EventMention_Type
  • org.apache.ctakes.typesystem.type.textsem.EventMention_Type
  • org.apache.ctakes.typesystem.type.textsem.EventMention_Type
  • org.apache.ctakes.temporal.ae.feature.EventPositionFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.EventPositionRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.data.analysis.EventPrinterPipeline
  • org.apache.ctakes.temporal.pipelines.EventPrintingPipeline
  • org.apache.ctakes.typesystem.type.refsem.EventProperties
  • org.apache.ctakes.typesystem.type.refsem.EventProperties
  • org.apache.ctakes.typesystem.type.refsem.EventProperties
  • org.apache.ctakes.typesystem.type.refsem.EventProperties_Type
  • org.apache.ctakes.typesystem.type.refsem.EventProperties_Type
  • org.apache.ctakes.typesystem.type.refsem.EventProperties_Type
  • org.apache.ctakes.temporal.ae.feature.EventPropertyExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • java.awt.EventQueue
    • org.apache.ctakes.gui.action.GlobalHotKeyManager (implements org.apache.ctakes.gui.action.HotKeyManager)
  • org.apache.ctakes.temporal.duration.EventTimeDurationStatistics
  • org.apache.ctakes.temporal.ae.feature.treekernel.EventTimeFlatTreeFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.EventTimeRelationFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.EventTimeRelationsFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.nn.data.EventTimeRelPositionPrinter
  • org.apache.ctakes.temporal.nn.data.EventTimeRelPrinter
  • org.apache.ctakes.ytex.weka.ExportBagOfWords
  • org.apache.ctakes.ytex.tools.ExportCAS
  • org.apache.ctakes.ytex.weka.ExportGramMatrix
  • org.apache.ctakes.temporal.duration.ExtractDurationsUsingContainsRelation
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.ExtractorListFeatureFunctionConverter
  • org.apache.ctakes.dictionary.lookup2.util.FastLookupToken
  • org.apache.ctakes.ytex.kernel.model.FeatureEvaluation (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.model.FeatureParentChild (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.model.FeatureRank (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.model.FeatureRank.FeatureRankAsc (implements java.util.Comparator<T>)
  • org.apache.ctakes.ytex.kernel.model.FeatureRank.FeatureRankDesc (implements java.util.Comparator<T>)
  • org.apache.uima.cas.impl.FeatureStructureImpl (implements java.lang.Cloneable, org.apache.uima.cas.FeatureStructure)
    • org.apache.uima.jcas.cas.TOP
      • org.apache.uima.jcas.cas.AnnotationBase (implements org.apache.uima.cas.AnnotationBaseFS)
        • org.apache.uima.jcas.tcas.Annotation (implements org.apache.uima.cas.text.AnnotationFS)
          • org.apache.ctakes.assertion.medfacts.types.Assertion
          • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation
          • org.apache.ctakes.smokingstatus.type.libsvm.AttributeValue
            • org.apache.ctakes.smokingstatus.type.libsvm.DateAttributeValue
            • org.apache.ctakes.smokingstatus.type.libsvm.NominalAttributeValue
            • org.apache.ctakes.smokingstatus.type.libsvm.NumericAttributeValue
            • org.apache.ctakes.smokingstatus.type.libsvm.StringAttributeValue
          • org.apache.ctakes.typesystem.type.syntax.BaseToken
            • org.apache.ctakes.typesystem.type.syntax.ContractionToken
            • org.apache.ctakes.typesystem.type.syntax.NewlineToken
            • org.apache.ctakes.typesystem.type.syntax.NumToken
            • org.apache.ctakes.typesystem.type.syntax.PunctuationToken
            • org.apache.ctakes.typesystem.type.syntax.SymbolToken
            • org.apache.ctakes.typesystem.type.syntax.WordToken
          • org.apache.ctakes.constituency.parser.uima.type.BooleanLabeledTree
          • org.apache.ctakes.typesystem.type.syntax.Chunk
            • org.apache.ctakes.typesystem.type.syntax.ADJP
            • org.apache.ctakes.typesystem.type.syntax.ADVP
            • org.apache.ctakes.typesystem.type.syntax.CONJP
            • org.apache.ctakes.typesystem.type.syntax.INTJ
            • org.apache.ctakes.typesystem.type.syntax.LST
            • org.apache.ctakes.typesystem.type.syntax.NP
            • org.apache.ctakes.typesystem.type.syntax.O
            • org.apache.ctakes.typesystem.type.syntax.PP
            • org.apache.ctakes.typesystem.type.syntax.PRT
            • org.apache.ctakes.typesystem.type.syntax.SBAR
            • org.apache.ctakes.typesystem.type.syntax.UCP
            • org.apache.ctakes.typesystem.type.syntax.VP
          • org.apache.ctakes.drugner.type.ChunkAnnotation
          • org.apache.ctakes.assertion.medfacts.types.Concept
          • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode
          • org.apache.ctakes.ytex.uima.types.Date
          • org.apache.ctakes.drugner.type.DecimalStrengthAnnotation
          • org.apache.ctakes.ytex.uima.types.DocKey
          • org.apache.ctakes.smokingstatus.type.libsvm.DocumentID
          • org.apache.ctakes.drugner.type.DosagesAnnotation
          • org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation
          • org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation
          • org.apache.ctakes.drugner.type.DrugMentionAnnotation
          • org.apache.ctakes.drugner.type.DurationAnnotation
          • org.apache.ctakes.drugner.type.FormAnnotation
          • org.apache.ctakes.drugner.type.FractionStrengthAnnotation
          • org.apache.ctakes.drugner.type.FrequencyAnnotation
          • org.apache.ctakes.drugner.type.FrequencyUnitAnnotation
          • org.apache.ctakes.assertion.zoner.types.Heading
          • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
            • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation
            • org.apache.ctakes.typesystem.type.textsem.DateAnnotation
            • org.apache.ctakes.typesystem.type.textsem.EntityMention
              • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention
            • org.apache.ctakes.typesystem.type.textsem.EventMention
              • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention
              • org.apache.ctakes.typesystem.type.textsem.LabMention
              • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention
              • org.apache.ctakes.typesystem.type.textsem.MedicationMention
              • org.apache.ctakes.typesystem.type.textsem.ProcedureMention
              • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention
            • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation
            • org.apache.ctakes.typesystem.type.textsem.Markable
            • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation
            • org.apache.ctakes.typesystem.type.textsem.Modifier
              • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier
              • org.apache.ctakes.typesystem.type.textsem.BodySideModifier
              • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier
              • org.apache.ctakes.typesystem.type.textsem.CourseModifier
              • org.apache.ctakes.typesystem.type.textsem.GenericModifier
              • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier
              • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier
              • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier
              • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier
              • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier
              • org.apache.ctakes.typesystem.type.textsem.LabValueModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier
              • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier
              • org.apache.ctakes.typesystem.type.textsem.PolarityModifier
              • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier
              • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier
              • org.apache.ctakes.typesystem.type.textsem.SeverityModifier
              • org.apache.ctakes.typesystem.type.textsem.SubjectModifier
              • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier
            • org.apache.ctakes.smokingstatus.type.NonSmokerNamedEntityAnnotation
            • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation
            • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation
            • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation
            • org.apache.ctakes.smokingstatus.type.SmokerNamedEntityAnnotation
            • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation
            • org.apache.ctakes.typesystem.type.textsem.TimeMention
            • org.apache.ctakes.smokingstatus.type.UnknownSmokerNamedEntityAnnotation
          • org.apache.ctakes.typesystem.type.textspan.List
          • org.apache.ctakes.typesystem.type.textspan.ListEntry
          • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation
          • org.apache.ctakes.coreference.type.Markable
            • org.apache.ctakes.coreference.type.DemMarkable
            • org.apache.ctakes.coreference.type.NEMarkable
            • org.apache.ctakes.coreference.type.PronounMarkable
          • org.apache.ctakes.coreference.type.MarkablePairSet
          • org.apache.ctakes.typesystem.type.textspan.Paragraph
          • org.apache.ctakes.typesystem.type.textsem.Predicate
          • org.apache.ctakes.sideeffect.type.PSESentence
          • org.apache.ctakes.sideeffect.type.PSESentenceFeature
          • org.apache.ctakes.drugner.type.RangeStrengthAnnotation
          • org.apache.ctakes.smokingstatus.i2b2.type.RecordSentence
          • org.apache.ctakes.drugner.type.RouteAnnotation
          • org.apache.ctakes.typesystem.type.textspan.Segment
          • org.apache.ctakes.typesystem.type.textsem.SemanticArgument
          • org.apache.ctakes.typesystem.type.textspan.Sentence
          • org.apache.ctakes.sideeffect.type.SESentence
          • org.apache.ctakes.sideeffect.type.SideEffectAnnotation
          • org.apache.ctakes.smokingstatus.type.SmokingDocumentClassification
          • org.apache.ctakes.drugner.type.StrengthAnnotation
          • org.apache.ctakes.drugner.type.StrengthUnitAnnotation
          • org.apache.ctakes.drugner.type.SubSectionAnnotation
          • org.apache.ctakes.assertion.zoner.types.Subzone
          • org.apache.ctakes.drugner.type.SuffixStrengthAnnotation
          • org.apache.ctakes.typesystem.type.syntax.TreebankNode
            • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode
            • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode
          • org.apache.ctakes.assertion.zoner.types.Zone
      • org.apache.ctakes.coreference.type.BooleanLabeledFS
      • org.apache.ctakes.typesystem.type.structured.Demographics
      • org.apache.ctakes.typesystem.type.structured.DocumentClassification
      • org.apache.ctakes.typesystem.type.structured.DocumentID
      • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix
      • org.apache.ctakes.typesystem.type.structured.DocumentPath
      • org.apache.ctakes.typesystem.type.refsem.Element
        • org.apache.ctakes.typesystem.type.refsem.Attribute
          • org.apache.ctakes.typesystem.type.refsem.BodyLaterality
          • org.apache.ctakes.typesystem.type.refsem.BodySide
          • org.apache.ctakes.typesystem.type.refsem.Course
          • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag
          • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange
          • org.apache.ctakes.typesystem.type.refsem.LabValue
          • org.apache.ctakes.typesystem.type.refsem.MedicationDosage
          • org.apache.ctakes.typesystem.type.refsem.MedicationDuration
          • org.apache.ctakes.typesystem.type.refsem.MedicationForm
          • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency
          • org.apache.ctakes.typesystem.type.refsem.MedicationRoute
          • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange
          • org.apache.ctakes.typesystem.type.refsem.MedicationStrength
          • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice
          • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod
          • org.apache.ctakes.typesystem.type.refsem.Severity
        • org.apache.ctakes.typesystem.type.refsem.Date
        • org.apache.ctakes.typesystem.type.refsem.Entity
          • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite
        • org.apache.ctakes.typesystem.type.refsem.Event
          • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder
          • org.apache.ctakes.typesystem.type.refsem.Lab
          • org.apache.ctakes.typesystem.type.refsem.Medication
          • org.apache.ctakes.typesystem.type.refsem.Procedure
          • org.apache.ctakes.typesystem.type.refsem.SignSymptom
        • org.apache.ctakes.typesystem.type.refsem.Time
      • org.apache.ctakes.typesystem.type.refsem.EventProperties
      • org.apache.ctakes.ytex.uima.types.KeyValuePair
      • org.apache.ctakes.typesystem.type.syntax.Lemma
      • org.apache.ctakes.coreference.type.MarkablePair
      • org.apache.ctakes.typesystem.type.structured.Metadata
      • org.apache.ctakes.typesystem.type.refsem.OntologyConcept
        • org.apache.ctakes.typesystem.type.refsem.UmlsConcept
      • org.apache.ctakes.coreference.type.Pair
      • org.apache.ctakes.typesystem.type.util.Pair
      • org.apache.ctakes.typesystem.type.util.Pairs
        • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution
      • org.apache.ctakes.typesystem.type.relation.Relation
        • org.apache.ctakes.typesystem.type.relation.AttributeRelation
          • org.apache.ctakes.typesystem.type.relation.DegreeOf
        • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation
          • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation
          • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation
          • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation
          • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation
          • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation
          • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation
          • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation
          • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation
          • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation
          • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation
          • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation
          • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation
          • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation
          • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation
          • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation
          • org.apache.ctakes.typesystem.type.syntax.StanfordDependency
          • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation
          • org.apache.ctakes.typesystem.type.relation.UMLSRelation
        • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation
        • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation
        • org.apache.ctakes.typesystem.type.relation.ElementRelation
          • org.apache.ctakes.typesystem.type.relation.Affects
          • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout
          • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts
          • org.apache.ctakes.typesystem.type.relation.Contraindicates
          • org.apache.ctakes.typesystem.type.relation.Diagnoses
          • org.apache.ctakes.typesystem.type.relation.Indicates
          • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor
          • org.apache.ctakes.typesystem.type.relation.LocationOf
          • org.apache.ctakes.typesystem.type.relation.ManagesTreats
          • org.apache.ctakes.typesystem.type.relation.ManifestationOf
          • org.apache.ctakes.typesystem.type.relation.Prevents
          • org.apache.ctakes.typesystem.type.relation.ResultOf
          • org.apache.ctakes.typesystem.type.relation.TemporalRelation
        • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation
      • org.apache.ctakes.typesystem.type.relation.RelationArgument
      • org.apache.ctakes.typesystem.type.structured.SourceData
  • org.apache.ctakes.coreference.util.FeatureVector
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.FedaFeatureFunction (implements org.cleartk.ml.feature.function.FeatureFunction)
  • org.apache.ctakes.dictionary.lookup.strtable.FieldConstraintImpl (implements org.apache.ctakes.dictionary.lookup.strtable.FieldConstraint)
  • org.apache.ctakes.core.resource.FileLocator
  • org.apache.ctakes.core.resource.FileResourceImpl (implements org.apache.ctakes.core.resource.FileResource, org.apache.uima.resource.SharedResourceObject)
  • org.apache.ctakes.gui.dictionary.util.FileUtil
  • org.apache.ctakes.jdl.common.FileUtil
  • org.apache.ctakes.ytex.kernel.FileUtil
  • org.apache.ctakes.ytex.kernel.FileUtil.DirectoryFileFilter (implements java.io.FileFilter)
  • org.apache.ctakes.ytex.kernel.FileUtil.PrefixFileFilter (implements java.io.FileFilter)
  • org.apache.ctakes.ytex.kernel.FileUtil.SuffixFileFilter (implements java.io.FileFilter)
  • org.apache.ctakes.dictionary.lookup.ae.FirstTokenPermLookupInitializerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupInitializer)
  • org.apache.ctakes.ytex.uima.lookup.ae.FirstTokenPermLookupInitializerImpl (implements org.apache.ctakes.dictionary.lookup.ae.LookupInitializer)
  • org.apache.ctakes.dictionary.lookup.algorithms.FirstTokenPermutationImpl (implements org.apache.ctakes.dictionary.lookup.algorithms.LookupAlgorithm)
  • org.apache.ctakes.relationextractor.ae.features.FlatTreeFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.uima.flow.FlowController_ImplBase (implements org.apache.uima.flow.FlowController)
    • org.apache.uima.flow.JCasFlowController_ImplBase
      • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.CorefEvalFlowController
  • org.apache.ctakes.ytex.kernel.FoldGeneratorImpl (implements org.apache.ctakes.ytex.kernel.FoldGenerator)
  • org.apache.ctakes.drugner.elements.FormElement
  • org.apache.ctakes.drugner.fsm.machines.elements.FormFSM
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.FractionFSM
  • org.apache.ctakes.drugner.fsm.machines.elements.FractionStrengthFSM
  • org.apache.ctakes.utils.tree.FragmentUtils
  • org.apache.ctakes.temporal.ae.feature.FramesetCategoryExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.drugner.elements.FrequencyElement
  • org.apache.ctakes.drugner.fsm.machines.elements.FrequencyFSM
  • org.apache.ctakes.drugner.elements.FrequencyUnitElement
  • org.apache.ctakes.drugner.fsm.machines.elements.FrequencyUnitFSM
  • org.apache.ctakes.coreference.util.FSIteratorToList
  • org.apache.ctakes.core.util.FSUtil
  • org.apache.ctakes.ytex.web.search.FullTextDocumentViewBean
  • org.apache.ctakes.ytex.web.search.FullTextSearchBean
  • org.apache.ctakes.assertion.pipelines.GenerateDependencyRepresentation
  • org.apache.ctakes.assertion.pipelines.GenerateDependencyRepresentation.Options
  • org.apache.ctakes.core.pipeline.GenerateSentenceBIODescriptors
  • org.apache.ctakes.smokingstatus.MLutil.GenerateTrainingData
  • org.apache.ctakes.assertion.pipelines.GenerateTreeRepresentation
  • org.apache.ctakes.assertion.pipelines.GenerateTreeRepresentation.Options
  • org.apache.ctakes.assertion.attributes.generic.GenericAttributeClassifier
  • org.apache.ctakes.assertion.attributes.features.GenericFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.GenericModifier_Type
  • org.apache.ctakes.relationextractor.data.GoldAnnotationAnalysisPipeline
  • org.apache.ctakes.relationextractor.data.GoldAnnotationAnalysisPipeline.Options
  • org.apache.ctakes.assertion.pipelines.GoldEntityAndAttributeReaderPipeline
  • org.apache.ctakes.assertion.pipelines.GoldEntityAndAttributeReaderPipelineForSeedCorpus
  • org.apache.ctakes.temporal.nn.data.GoldEventPrinter
  • org.apache.ctakes.temporal.nn.data.GoldEventPrinterWithLabels
  • org.apache.ctakes.relationextractor.data.analysis.GoldRelationViewer
  • org.apache.ctakes.temporal.data.analysis.GoldRelationViewer
  • org.apache.ctakes.coreference.util.GoldStandardLabeler
  • org.apache.ctakes.coreference.ae.features.salience.GrammaticalRoleFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.ytex.weka.GramMatrixExporterImpl.GramMatrixArffDecorator (implements org.apache.ctakes.ytex.kernel.BagOfWordsDecorator)
  • org.apache.ctakes.core.util.collection.HashSetMap<K,V> (implements org.apache.ctakes.core.util.collection.CollectionMap<K,V,T>)
  • org.apache.ctakes.examples.pipeline.HelloWorldAggregatePipeline
  • org.apache.ctakes.examples.pipeline.HelloWorldBuilderRunner
  • org.apache.ctakes.examples.pipeline.HelloWorldCuiPiperRunner
  • org.apache.ctakes.examples.pipeline.HelloWorldPiperRunner
  • org.apache.ctakes.examples.pipeline.HelloWorldPropsPiperRunner
  • org.apache.ctakes.assertion.attributes.history.HistoryAttributeClassifier
  • org.apache.ctakes.assertion.attributes.history.HistoryAttributeClassifier.AnnotLocationComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.assertion.attributes.features.HistoryFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier_Type
  • org.apache.ctakes.coreference.util.HobbsTreeNavigator
  • org.apache.ctakes.gui.dictionary.util.HsqlUtil
  • org.apache.ctakes.drugner.fsm.machines.util.HyphenatedDrugFSM
  • org.apache.ctakes.core.nlp.tokenizer.HyphenatedPTB
  • org.apache.ctakes.core.ci.HyphenTextModifierImpl (implements org.apache.ctakes.core.ci.TextModifier)
  • org.apache.ctakes.temporal.eval.I2B2Data
  • org.apache.ctakes.gui.util.IconLoader
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type
  • org.apache.ctakes.temporal.ae.feature.IdentifiedAnnotationFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.core.util.collection.ImmutableCollectionMap<K,V,T> (implements org.apache.ctakes.core.util.collection.CollectionMap<K,V,T>)
  • org.apache.ctakes.ytex.weka.ImportWekaResults
  • org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluatorImpl (implements org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluator)
  • org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluatorImpl.ConceptInstanceMapExtractor (implements org.springframework.jdbc.core.RowCallbackHandler)
  • org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluatorImpl.JointDistribution
  • org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluatorImpl.Parameters
  • org.apache.ctakes.typesystem.type.relation.Indicates
  • org.apache.ctakes.typesystem.type.relation.Indicates
  • org.apache.ctakes.typesystem.type.relation.Indicates
  • org.apache.ctakes.typesystem.type.relation.Indicates_Type
  • org.apache.ctakes.typesystem.type.relation.Indicates_Type
  • org.apache.ctakes.typesystem.type.relation.Indicates_Type
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation_Type
  • org.apache.ctakes.ytex.kernel.InfoContentEvaluatorImpl (implements org.apache.ctakes.ytex.kernel.InfoContentEvaluator)
  • org.apache.ctakes.ytex.uima.resource.InitableJdbcConnectionResourceImpl (implements org.apache.ctakes.core.resource.JdbcConnectionResource, org.apache.uima.resource.SharedResourceObject)
  • org.apache.ctakes.ytex.kernel.InstanceData
  • org.apache.ctakes.ytex.sparsematrix.InstanceDataExporterImpl (implements org.apache.ctakes.ytex.sparsematrix.InstanceDataExporter)
  • org.apache.ctakes.ytex.kernel.tree.InstanceTreeBuilderImpl (implements org.apache.ctakes.ytex.kernel.tree.InstanceTreeBuilder)
  • org.apache.ctakes.preprocessor.IntegerRange
  • org.apache.ctakes.typesystem.type.syntax.INTJ
  • org.apache.ctakes.typesystem.type.syntax.INTJ
  • org.apache.ctakes.typesystem.type.syntax.INTJ
  • org.apache.ctakes.typesystem.type.syntax.INTJ_Type
  • org.apache.ctakes.typesystem.type.syntax.INTJ_Type
  • org.apache.ctakes.typesystem.type.syntax.INTJ_Type
  • org.apache.ctakes.ytex.kernel.IntrinsicInfoContentEvaluatorImpl (implements org.apache.ctakes.ytex.kernel.IntrinsicInfoContentEvaluator)
  • org.apache.ctakes.ytex.kernel.IntrinsicInfoContentEvaluatorImpl.IntrinsicICInfo
  • org.apache.ctakes.ytex.kernel.IRMetrics
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor_Type
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor_Type
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor_Type
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation_Type
  • org.apache.ctakes.ytex.uima.mapper.ISO8601Converter (implements org.apache.commons.beanutils.Converter)
  • org.apache.ctakes.assertion.stub.JarafeMEDecoder
  • org.cleartk.ml.jar.JarClassifierBuilder<CLASSIFIER_TYPE>
    • org.cleartk.ml.jar.EncodingJarClassifierBuilder<CLASSIFIER_TYPE,ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE>
      • org.cleartk.ml.jar.ClassifierBuilder_ImplBase<CLASSIFIER_TYPE,ENCODED_FEATURES_TYPE,OUTCOME_TYPE,ENCODED_OUTCOME_TYPE>
        • org.apache.ctakes.temporal.keras.ScriptStringOutcomeClassifierBuilder<T>
          • org.apache.ctakes.temporal.keras.KerasStringOutcomeClassifierBuilder
  • org.apache.ctakes.core.util.JCasUtil
  • org.apache.ctakes.core.resource.JdbcConnectionResourceImpl (implements org.apache.ctakes.core.resource.JdbcConnectionResource, org.apache.uima.resource.SharedResourceObject)
  • org.apache.ctakes.jdl.schema.xdl.JdbcType
  • org.apache.ctakes.gui.dictionary.util.JdbcUtil
  • org.apache.ctakes.jdl.data.base.JdlConnection
  • org.apache.ctakes.assertion.train.JustJudgeStep
  • org.apache.ctakes.utils.kernel.Kernel
    • org.apache.ctakes.utils.kernel.PolyKernel
      • org.apache.ctakes.utils.kernel.LinearKernel
    • org.apache.ctakes.utils.kernel.RBFKernel
    • org.apache.ctakes.constituency.parser.treekernel.TreeKernel
  • org.apache.ctakes.ytex.kernel.KernelContextHolder
  • org.apache.ctakes.ytex.kernel.model.KernelEvaluation (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.dao.KernelEvaluationDaoImpl (implements org.apache.ctakes.ytex.kernel.dao.KernelEvaluationDao)
  • org.apache.ctakes.ytex.kernel.model.KernelEvaluationInstance (implements java.io.Serializable)
  • org.apache.ctakes.ytex.KernelLauncher
  • org.apache.ctakes.coreference.treekernel.training.KernelMatrixCompositor
  • org.apache.ctakes.ytex.kernel.KernelUtilImpl (implements org.apache.ctakes.ytex.kernel.KernelUtil)
  • org.apache.ctakes.core.knowtator.KnowtatorAnnotation
  • org.apache.ctakes.core.knowtator.KnowtatorAnnotation.Span
  • org.apache.ctakes.core.knowtator.KnowtatorXMLParser
  • org.apache.ctakes.typesystem.type.refsem.Lab
  • org.apache.ctakes.typesystem.type.refsem.Lab
  • org.apache.ctakes.typesystem.type.refsem.Lab
  • org.apache.ctakes.typesystem.type.refsem.Lab_Type
  • org.apache.ctakes.typesystem.type.refsem.Lab_Type
  • org.apache.ctakes.typesystem.type.refsem.Lab_Type
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag_Type
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag_Type
  • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag_Type
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabMention
  • org.apache.ctakes.typesystem.type.textsem.LabMention
  • org.apache.ctakes.typesystem.type.textsem.LabMention
  • org.apache.ctakes.typesystem.type.textsem.LabMention_Type
  • org.apache.ctakes.typesystem.type.textsem.LabMention_Type
  • org.apache.ctakes.typesystem.type.textsem.LabMention_Type
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange_Type
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange_Type
  • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange_Type
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.LabValue
  • org.apache.ctakes.typesystem.type.refsem.LabValue
  • org.apache.ctakes.typesystem.type.refsem.LabValue
  • org.apache.ctakes.typesystem.type.refsem.LabValue_Type
  • org.apache.ctakes.typesystem.type.refsem.LabValue_Type
  • org.apache.ctakes.typesystem.type.refsem.LabValue_Type
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.LabValueModifier_Type
  • org.apache.ctakes.ytex.kernel.metric.LCSPath (implements java.io.Serializable)
  • org.apache.ctakes.typesystem.type.syntax.Lemma
  • org.apache.ctakes.typesystem.type.syntax.Lemma
  • org.apache.ctakes.typesystem.type.syntax.Lemma
  • org.apache.ctakes.typesystem.type.syntax.Lemma_Type
  • org.apache.ctakes.typesystem.type.syntax.Lemma_Type
  • org.apache.ctakes.typesystem.type.syntax.Lemma_Type
  • org.apache.ctakes.ytex.libsvm.LibSVMFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.ytex.libsvm.LibSVMGramMatrixExporterImpl (implements org.apache.ctakes.ytex.libsvm.LibSVMGramMatrixExporter)
  • org.apache.ctakes.ytex.libsvm.LibSVMUtilImpl (implements org.apache.ctakes.ytex.libsvm.LibSVMUtil)
  • org.apache.ctakes.assertion.stub.LineAndTokenPosition
  • org.apache.ctakes.coreference.treekernel.training.LinearKernelMatrixWriter (implements org.apache.ctakes.coreference.util.ThreadDelegator)
  • org.apache.ctakes.core.resource.LinesFromFileStringsResourceImpl (implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.StringsResource)
  • org.apache.ctakes.assertion.stub.LineTokenToCharacterOffsetConverter
  • org.apache.ctakes.assertion.stub.LineTokenToCharacterOffsetConverter.BeginAndEndCharacterOffsetPair
  • org.apache.ctakes.typesystem.type.textspan.List
  • org.apache.ctakes.typesystem.type.textspan.List
  • org.apache.ctakes.typesystem.type.textspan.List
  • org.apache.ctakes.typesystem.type.textspan.List_Type
  • org.apache.ctakes.typesystem.type.textspan.List_Type
  • org.apache.ctakes.typesystem.type.textspan.List_Type
  • org.apache.ctakes.typesystem.type.textspan.ListEntry
  • org.apache.ctakes.typesystem.type.textspan.ListEntry
  • org.apache.ctakes.typesystem.type.textspan.ListEntry
  • org.apache.ctakes.typesystem.type.textspan.ListEntry_Type
  • org.apache.ctakes.typesystem.type.textspan.ListEntry_Type
  • org.apache.ctakes.typesystem.type.textspan.ListEntry_Type
  • org.apache.ctakes.core.util.ListFactory
  • org.apache.ctakes.temporal.ae.feature.ListFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.core.util.ListIterable<T> (implements java.lang.Iterable<T>)
  • org.apache.ctakes.jdl.data.loader.Loader
    • org.apache.ctakes.jdl.data.loader.CsvLoader
    • org.apache.ctakes.jdl.data.loader.XmlLoader
  • org.apache.ctakes.jdl.schema.xdl.LoadType
  • org.apache.ctakes.typesystem.type.relation.LocationOf
  • org.apache.ctakes.typesystem.type.relation.LocationOf
  • org.apache.ctakes.typesystem.type.relation.LocationOf
  • org.apache.ctakes.typesystem.type.relation.LocationOf_Type
  • org.apache.ctakes.typesystem.type.relation.LocationOf_Type
  • org.apache.ctakes.typesystem.type.relation.LocationOf_Type
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation_Type
  • org.apache.ctakes.dictionary.lookup.ae.LookupAnnotationToJCasAdapter (implements org.apache.ctakes.dictionary.lookup.vo.LookupToken)
  • org.apache.ctakes.dictionary.lookup.vo.LookupAnnotationToTokAdapter (implements org.apache.ctakes.dictionary.lookup.vo.LookupToken)
  • org.apache.ctakes.dictionary.lookup.vo.LookupHit
  • org.apache.ctakes.dictionary.lookup.ae.LookupParseUtilities
  • org.apache.ctakes.dictionary.lookup.ae.LookupParseUtilitiesRefactor
  • org.apache.ctakes.dictionary.lookup.ae.LookupSpec
  • org.apache.ctakes.dictionary.lookup2.util.LookupUtil
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation_Type
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation_Type
  • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation_Type
  • org.apache.ctakes.typesystem.type.syntax.LST
  • org.apache.ctakes.typesystem.type.syntax.LST
  • org.apache.ctakes.typesystem.type.syntax.LST
  • org.apache.ctakes.typesystem.type.syntax.LST_Type
  • org.apache.ctakes.typesystem.type.syntax.LST_Type
  • org.apache.ctakes.typesystem.type.syntax.LST_Type
  • org.apache.ctakes.core.resource.LuceneIndexReaderResourceImpl (implements org.apache.ctakes.core.resource.LuceneIndexReaderResource, org.apache.uima.resource.SharedResourceObject)
  • org.apache.ctakes.lvg.resource.LvgCmdApiResourceImpl (implements org.apache.ctakes.lvg.resource.LvgCmdApiResource, org.apache.uima.resource.SharedResourceObject)
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats_Type
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats_Type
  • org.apache.ctakes.typesystem.type.relation.ManagesTreats_Type
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOf_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation_Type
  • org.apache.ctakes.utils.struct.MapFactory
  • org.apache.ctakes.core.util.Mapper
  • org.apache.ctakes.ytex.uima.mapper.MapperConfig
  • org.apache.ctakes.typesystem.type.textsem.Markable
  • org.apache.ctakes.typesystem.type.textsem.Markable
  • org.apache.ctakes.typesystem.type.textsem.Markable
  • org.apache.ctakes.typesystem.type.textsem.Markable_Type
  • org.apache.ctakes.typesystem.type.textsem.Markable_Type
  • org.apache.ctakes.typesystem.type.textsem.Markable_Type
  • org.apache.ctakes.coreference.util.MarkableDepUtils
  • org.apache.ctakes.coreference.ae.MarkableHeadTreeCreator.MarkableDepheadPairComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.coreference.util.MarkableTreeUtils
  • org.apache.ctakes.coreference.util.MarkableUtilities
  • org.apache.ctakes.core.cleartk.MaxContext (implements org.cleartk.ml.feature.extractor.CleartkExtractor.Context)
  • org.apache.ctakes.constituency.parser.MaxentParserWrapper (implements org.apache.ctakes.constituency.parser.ParserWrapper)
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.MeasurementFSM
  • org.apache.ctakes.typesystem.type.refsem.Medication
  • org.apache.ctakes.typesystem.type.refsem.Medication
  • org.apache.ctakes.typesystem.type.refsem.Medication
  • org.apache.ctakes.typesystem.type.refsem.Medication_Type
  • org.apache.ctakes.typesystem.type.refsem.Medication_Type
  • org.apache.ctakes.typesystem.type.refsem.Medication_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDosage_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationDuration_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationForm_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationMention_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationRoute_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength_Type
  • org.apache.ctakes.typesystem.type.refsem.MedicationStrength_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier_Type
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterAgreementFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterAttributeFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterAttributeVectorExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.MentionClusterCoreferenceAnnotator.CollectionTextRelationIdentifiedAnnotationPair
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterDepHeadExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterDistanceFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterDistSemExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterMentionFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.coreference.ae.MentionClusterRankingCoreferenceAnnotator.CollectionTextRelationIdentifiedAnnotationPair
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterSalienceFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterSectionFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterSemTypeDepPrefsFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterStackFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterStringFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.cluster.MentionClusterUMLSFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>, org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.structured.Metadata
  • org.apache.ctakes.typesystem.type.structured.Metadata
  • org.apache.ctakes.typesystem.type.structured.Metadata
  • org.apache.ctakes.typesystem.type.structured.Metadata_Type
  • org.apache.ctakes.typesystem.type.structured.Metadata_Type
  • org.apache.ctakes.typesystem.type.structured.Metadata_Type
  • org.apache.ctakes.dictionary.lookup.MetaDataHitComparator (implements java.util.Comparator<T>, org.apache.ctakes.dictionary.lookup.MetaDataHitConst)
  • org.apache.ctakes.dictionary.lookup.filter.MetaDataPostLookupFilterImpl (implements org.apache.ctakes.dictionary.lookup.filter.PostLookupFilter)
  • org.apache.ctakes.ytex.uima.annotators.MetaMapToCTakesAnnotator.NegSpan
  • org.apache.ctakes.relationextractor.metastasis.MetastasisXmiGenerationPipeline
  • org.apache.ctakes.ytex.kernel.evaluator.MethodCachingInterceptor (implements org.springframework.beans.factory.InitializingBean, org.aopalliance.intercept.MethodInterceptor)
  • org.apache.ctakes.core.cleartk.MinContext (implements org.cleartk.ml.feature.extractor.CleartkExtractor.Context)
  • org.apache.ctakes.typesystem.type.textsem.Modifier
  • org.apache.ctakes.typesystem.type.textsem.Modifier
  • org.apache.ctakes.typesystem.type.textsem.Modifier
  • org.apache.ctakes.typesystem.type.textsem.Modifier_Type
  • org.apache.ctakes.typesystem.type.textsem.Modifier_Type
  • org.apache.ctakes.typesystem.type.textsem.Modifier_Type
  • org.apache.ctakes.coreference.ae.features.salience.MorphosyntacticFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.ytex.umls.model.MRCONSO (implements java.io.Serializable)
  • org.apache.ctakes.gui.dictionary.umls.MrconsoParser
  • org.apache.ctakes.ytex.umls.model.MRREL (implements java.io.Serializable)
  • org.apache.ctakes.ytex.umls.model.MRSTY (implements java.io.Serializable)
  • org.apache.ctakes.gui.dictionary.umls.MrstyParser
  • org.apache.ctakes.dictionary.lookup2.textspan.MultiTextSpan (implements org.apache.ctakes.dictionary.lookup2.textspan.TextSpan)
  • org.apache.ctakes.temporal.ae.feature.MultiTokenFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.assertion.attributes.features.selection.MutualInformationFeatureSelection.MutualInformationStats<OUTCOME_T>
  • org.apache.ctakes.temporal.ae.feature.selection.MutualInformationFeatureSelection.MutualInformationStats<OUTCOME_T>
  • org.apache.ctakes.necontexts.NamedEntityContextAnalyzer (implements org.apache.ctakes.necontexts.ContextAnalyzer)
    • org.apache.ctakes.necontexts.negation.NegationContextAnalyzer
    • org.apache.ctakes.necontexts.status.StatusContextAnalyzer (implements org.apache.ctakes.necontexts.ContextAnalyzer)
  • org.apache.ctakes.smokingstatus.context.NamedEntityContextAnalyzer (implements org.apache.ctakes.necontexts.ContextAnalyzer)
    • org.apache.ctakes.smokingstatus.context.negation.NegationContextAnalyzer
  • org.apache.ctakes.necontexts.NamedEntityContextHitConsumer (implements org.apache.ctakes.necontexts.ContextHitConsumer)
    • org.apache.ctakes.necontexts.negation.NegationContextHitConsumer (implements org.apache.ctakes.necontexts.ContextHitConsumer)
    • org.apache.ctakes.necontexts.status.StatusContextHitConsumer (implements org.apache.ctakes.necontexts.ContextHitConsumer)
  • org.apache.ctakes.relationextractor.ae.features.NamedEntityFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.ytex.uima.model.NamedEntityRegex (implements java.io.Serializable)
  • org.apache.ctakes.ytex.uima.dao.NamedEntityRegexDaoImpl (implements org.apache.ctakes.ytex.uima.dao.NamedEntityRegexDao)
  • org.apache.ctakes.temporal.ae.feature.NearbyVerbTenseRelationExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.NearbyVerbTenseXExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.NearestFlagFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.NegationDependencyFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.assertion.util.NegationDepRegex
  • org.apache.ctakes.core.fsm.machine.NegationFSM
  • org.apache.ctakes.smokingstatus.machine.NegationFSM
  • org.apache.ctakes.assertion.util.NegationManualDepContextAnalyzer
  • org.apache.ctakes.assertion.cr.NegExAnnotation
  • org.apache.ctakes.ytex.uima.annotators.NegexAnnotator.NamedEntityTargetAnnoFilter (implements org.apache.ctakes.ytex.uima.annotators.NegexAnnotator.TargetAnnoFilter)
  • org.apache.ctakes.ytex.uima.annotators.NegexAnnotator.NegexRule
  • org.apache.ctakes.ytex.uima.annotators.NegexAnnotator.NegexToken (implements java.lang.Comparable<T>)
  • org.apache.ctakes.drugner.fsm.machines.util.NegIndicatorFSM (implements org.apache.ctakes.core.fsm.machine.FSM)
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken_Type
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken_Type
  • org.apache.ctakes.typesystem.type.syntax.NewlineToken_Type
  • org.apache.ctakes.ytex.kernel.tree.Node (implements java.io.Serializable)
  • org.apache.ctakes.ytex.kernel.evaluator.NodeAttributeKernel (implements org.apache.ctakes.ytex.kernel.evaluator.Kernel)
  • org.apache.ctakes.ytex.kernel.tree.NodeKey
  • org.apache.ctakes.ytex.kernel.tree.NodeMappingInfo
  • org.apache.ctakes.drugner.fsm.machines.util.NonIndicatorFSM
  • org.apache.ctakes.ytex.kernel.evaluator.NormKernel (implements org.apache.ctakes.ytex.kernel.evaluator.Kernel)
  • org.apache.ctakes.typesystem.type.syntax.NP
  • org.apache.ctakes.typesystem.type.syntax.NP
  • org.apache.ctakes.typesystem.type.syntax.NP
  • org.apache.ctakes.typesystem.type.syntax.NP_Type
  • org.apache.ctakes.typesystem.type.syntax.NP_Type
  • org.apache.ctakes.typesystem.type.syntax.NP_Type
  • org.apache.ctakes.temporal.ae.feature.NumberOfEventsInTheSameSentenceExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.NumberOfEventTimeBetweenCandidatesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.syntax.NumToken
  • org.apache.ctakes.typesystem.type.syntax.NumToken
  • org.apache.ctakes.typesystem.type.syntax.NumToken
  • org.apache.ctakes.typesystem.type.syntax.NumToken_Type
  • org.apache.ctakes.typesystem.type.syntax.NumToken_Type
  • org.apache.ctakes.typesystem.type.syntax.NumToken_Type
  • org.apache.ctakes.typesystem.type.syntax.O
  • org.apache.ctakes.typesystem.type.syntax.O
  • org.apache.ctakes.typesystem.type.syntax.O
  • org.apache.ctakes.typesystem.type.syntax.O_Type
  • org.apache.ctakes.typesystem.type.syntax.O_Type
  • org.apache.ctakes.typesystem.type.syntax.O_Type
  • org.apache.ctakes.jdl.schema.xdl.ObjectFactory
  • org.apache.ctakes.jdl.data.xml.jaxb.ObjectFactoryBind
  • org.apache.ctakes.jdl.data.xml.jaxb.ObjectFactoryUtil
  • org.apache.ctakes.ytex.kernel.model.ObjPair<T1,T2>
  • org.apache.ctakes.core.nlp.tokenizer.OffsetComparator (implements java.util.Comparator<T>)
  • org.cleartk.ml.feature.transform.OneToOneTrainableExtractor_ImplBase<OUTCOME_T> (implements org.cleartk.ml.feature.transform.TrainableExtractor<OUTCOME_T>)
    • org.apache.ctakes.temporal.ae.feature.selection.ZscoreNormalizationExtractor<OUTCOME_T,FOCUS_T>
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept_Type
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept_Type
  • org.apache.ctakes.typesystem.type.refsem.OntologyConcept_Type
  • org.apache.ctakes.core.util.OntologyConceptUtil
  • org.apache.ctakes.ytex.kernel.OrderedPair<T>
  • org.apache.ctakes.ytex.kernel.pagerank.PageRankServiceImpl (implements org.apache.ctakes.ytex.kernel.pagerank.PageRankService)
  • org.apache.ctakes.typesystem.type.util.Pair
  • org.apache.ctakes.typesystem.type.util.Pair
  • org.apache.ctakes.typesystem.type.util.Pair
  • org.apache.ctakes.core.util.Pair<T>
  • org.apache.ctakes.ytex.kernel.Pair<T>
  • org.apache.ctakes.typesystem.type.util.Pair_Type
  • org.apache.ctakes.typesystem.type.util.Pair_Type
  • org.apache.ctakes.typesystem.type.util.Pair_Type
  • org.apache.ctakes.typesystem.type.util.Pairs
  • org.apache.ctakes.typesystem.type.util.Pairs
  • org.apache.ctakes.typesystem.type.util.Pairs
  • org.apache.ctakes.typesystem.type.util.Pairs_Type
  • org.apache.ctakes.typesystem.type.util.Pairs_Type
  • org.apache.ctakes.typesystem.type.util.Pairs_Type
  • org.apache.ctakes.typesystem.type.textspan.Paragraph
  • org.apache.ctakes.typesystem.type.textspan.Paragraph
  • org.apache.ctakes.typesystem.type.textspan.Paragraph
  • org.apache.ctakes.typesystem.type.textspan.Paragraph_Type
  • org.apache.ctakes.typesystem.type.textspan.Paragraph_Type
  • org.apache.ctakes.typesystem.type.textspan.Paragraph_Type
  • org.apache.ctakes.gui.pipeline.bit.parameter.ParameterCellRenderer (implements javax.swing.table.TableCellRenderer)
  • org.apache.ctakes.gui.pipeline.bit.parameter.ParameterMapper
  • org.apache.ctakes.relationextractor.eval.ParameterSettings
  • org.apache.ctakes.gui.pipeline.bit.parameter.ParameterTableModel (implements javax.swing.table.TableModel)
  • org.apache.ctakes.core.util.ParamUtil
  • org.apache.ctakes.coreference.util.ParentPtrTree
  • org.apache.ctakes.temporal.ae.feature.ParseFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.ParseSpanFeatureExtractor
  • org.apache.ctakes.relationextractor.ae.features.PartOfSpeechFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.assertion.stub.PartOfSpeechTagger
  • org.apache.ctakes.smokingstatus.patientLevel.PatientLevelSmokingStatus
  • org.apache.ctakes.sideeffect.util.PatternMatch
  • org.apache.ctakes.dictionary.lookup.algorithms.PermutationUtil
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.PersonTitleFSM
  • org.apache.ctakes.relationextractor.ae.features.PETFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.relationextractor.ae.features.PhraseChunkingExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.chunker.ae.PhraseTypeChunkCreator (implements org.apache.ctakes.chunker.ae.ChunkCreator)
  • org.apache.ctakes.gui.pipeline.bit.info.PipeBitInfoRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.core.pipeline.PipeBitInfoUtil
  • org.apache.ctakes.core.pipeline.PipelineBuilder
  • org.apache.ctakes.gui.pipeline.PiperCreator
  • org.apache.ctakes.gui.pipeline.PiperDisplayModel
  • org.apache.ctakes.core.pipeline.PiperFileReader
  • org.apache.ctakes.core.pipeline.PiperFileRunner
  • org.apache.ctakes.gui.pipeline.piper.PiperFinder
  • org.apache.ctakes.gui.pipeline.piper.PiperInfo
  • org.apache.ctakes.assertion.train.PolarityCotrainingTests
  • org.apache.ctakes.assertion.train.PolarityCotrainingTrain
  • org.apache.ctakes.assertion.train.PolarityDomainAdaptationTests
  • org.apache.ctakes.assertion.train.PolarityDomainAdaptationTrain
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.PolarityModifier_Type
  • org.apache.ctakes.dictionary.lookup.filter.PostLookupFilterGroupImpl (implements org.apache.ctakes.dictionary.lookup.filter.PostLookupFilter)
  • org.apache.ctakes.typesystem.type.syntax.PP
  • org.apache.ctakes.typesystem.type.syntax.PP
  • org.apache.ctakes.typesystem.type.syntax.PP
  • org.apache.ctakes.typesystem.type.syntax.PP_Type
  • org.apache.ctakes.typesystem.type.syntax.PP_Type
  • org.apache.ctakes.typesystem.type.syntax.PP_Type
  • org.apache.ctakes.typesystem.type.textsem.Predicate
  • org.apache.ctakes.typesystem.type.textsem.Predicate
  • org.apache.ctakes.typesystem.type.textsem.Predicate
  • org.apache.ctakes.typesystem.type.textsem.Predicate_Type
  • org.apache.ctakes.typesystem.type.textsem.Predicate_Type
  • org.apache.ctakes.typesystem.type.textsem.Predicate_Type
  • org.apache.ctakes.temporal.ae.feature.PredicateArgumentExtractor
  • org.apache.ctakes.relationextractor.ae.features.PrepositionFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.cc.PreprocessAndWriteXmi
  • org.apache.ctakes.coreference.cc.PreprocessAndWriteXmi.Options
  • org.apache.ctakes.core.cc.pretty.plaintext.PrettyTextWriter
  • org.apache.ctakes.typesystem.type.relation.Prevents
  • org.apache.ctakes.typesystem.type.relation.Prevents
  • org.apache.ctakes.typesystem.type.relation.Prevents
  • org.apache.ctakes.typesystem.type.relation.Prevents_Type
  • org.apache.ctakes.typesystem.type.relation.Prevents_Type
  • org.apache.ctakes.typesystem.type.relation.Prevents_Type
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation_Type
  • org.apache.ctakes.temporal.data.analysis.PrintFailedTimeNormalizations
  • org.apache.ctakes.temporal.data.analysis.PrintInconsistentAnnotations
  • org.apache.ctakes.temporal.data.analysis.PrintNonrelatedEvents
  • org.apache.ctakes.temporal.eval.PrintRelations
  • org.apache.ctakes.relationextractor.eval.PrintRelationStatistics
  • org.apache.ctakes.relationextractor.eval.PrintRelationStatistics.Options
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution_Type
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution_Type
  • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution_Type
  • org.apache.ctakes.typesystem.type.refsem.Procedure
  • org.apache.ctakes.typesystem.type.refsem.Procedure
  • org.apache.ctakes.typesystem.type.refsem.Procedure
  • org.apache.ctakes.typesystem.type.refsem.Procedure_Type
  • org.apache.ctakes.typesystem.type.refsem.Procedure_Type
  • org.apache.ctakes.typesystem.type.refsem.Procedure_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMention_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod_Type
  • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier_Type
  • org.apache.ctakes.examples.pipeline.ProcessDirBuilderRunner
  • org.apache.ctakes.examples.pipeline.ProcessDirPiperRunner
  • org.apache.ctakes.examples.pipeline.ProcessLinesClinicalRunner
  • org.apache.ctakes.jdl.common.PropertiesFile
  • org.apache.ctakes.core.cc.property.plaintext.PropertyTextWriter
  • org.apache.ctakes.jdl.common.PropFile
  • org.apache.ctakes.typesystem.type.syntax.PRT
  • org.apache.ctakes.typesystem.type.syntax.PRT
  • org.apache.ctakes.typesystem.type.syntax.PRT
  • org.apache.ctakes.typesystem.type.syntax.PRT_Type
  • org.apache.ctakes.typesystem.type.syntax.PRT_Type
  • org.apache.ctakes.typesystem.type.syntax.PRT_Type
  • org.apache.ctakes.relationextractor.ae.features.PunctuationFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken_Type
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken_Type
  • org.apache.ctakes.typesystem.type.syntax.PunctuationToken_Type
  • org.apache.ctakes.ytex.kernel.tree.QueryMappingInfo
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.RangeFSM
  • org.apache.ctakes.drugner.fsm.machines.elements.RangeStrengthFSM
  • org.apache.ctakes.gui.dictionary.util.RareWordDbWriter
  • org.apache.ctakes.dictionary.lookup2.term.RareWordTerm
  • org.apache.ctakes.dictionary.lookup2.dictionary.RareWordTermMapCreator
  • org.apache.ctakes.dictionary.lookup2.dictionary.RareWordTermMapCreator.CuiTerm
  • org.apache.ctakes.gui.dictionary.util.RareWordUtil
  • org.apache.ctakes.gui.dictionary.util.RareWordUtil.IndexedRareWord
  • org.apache.ctakes.assertion.train.ReadAndPreprocessForAttributeModels
  • org.apache.ctakes.assertion.train.ReadPreprocessTrainTestJudge
  • org.apache.ctakes.core.ae.RegexSectionizer.SectionType
  • org.apache.ctakes.core.util.regex.RegexSpanFinder (implements java.io.Closeable)
  • org.apache.ctakes.typesystem.type.relation.Relation
  • org.apache.ctakes.typesystem.type.relation.Relation
  • org.apache.ctakes.typesystem.type.relation.Relation
  • org.apache.ctakes.typesystem.type.relation.Relation_Type
  • org.apache.ctakes.typesystem.type.relation.Relation_Type
  • org.apache.ctakes.typesystem.type.relation.Relation_Type
  • org.apache.ctakes.relationextractor.pipelines.RelationAnnotationViewer
  • org.apache.ctakes.relationextractor.pipelines.RelationAnnotationViewer.Options
  • org.apache.ctakes.typesystem.type.relation.RelationArgument
  • org.apache.ctakes.typesystem.type.relation.RelationArgument
  • org.apache.ctakes.typesystem.type.relation.RelationArgument
  • org.apache.ctakes.typesystem.type.relation.RelationArgument_Type
  • org.apache.ctakes.typesystem.type.relation.RelationArgument_Type
  • org.apache.ctakes.typesystem.type.relation.RelationArgument_Type
  • org.apache.ctakes.temporal.data.analysis.RelationContextViewerPipeline
  • org.apache.ctakes.temporal.ae.feature.RelationEmbeddingFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.relationextractor.ae.RelationExtractorAnnotator.IdentifiedAnnotationPair
  • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.HashableArguments (implements java.lang.Comparable<T>)
  • org.apache.ctakes.relationextractor.pipelines.RelationExtractorPipeline
  • org.apache.ctakes.relationextractor.pipelines.RelationExtractorPipeline.Options
  • org.apache.ctakes.relationextractor.pipelines.RelationExtractorPipelineSingleCas
  • org.apache.ctakes.relationextractor.pipelines.RelationExtractorTrain
  • org.apache.ctakes.assertion.cr.RelationInfo
  • org.apache.ctakes.relationextractor.knowtator.RelationInfo
  • org.apache.ctakes.temporal.ae.feature.RelationSyntacticEmbeddingFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.RelationSyntacticETEmbeddingFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.smokingstatus.ae.ResolutionAnnotator
  • org.apache.uima.resource.Resource_ImplBase (implements org.apache.uima.resource.Resource)
    • org.apache.uima.resource.ConfigurableResource_ImplBase (implements org.apache.uima.resource.ConfigurableResource)
      • org.apache.uima.collection.CasConsumer_ImplBase (implements org.apache.uima.collection.CasConsumer)
        • org.apache.ctakes.core.cc.AbstractJdbcWriter
          • org.apache.ctakes.core.cc.JdbcWriterTemplate
        • org.apache.ctakes.core.cc.CasConsumer
        • org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel
        • org.apache.ctakes.dependency.parser.DependencyNodeWriter
        • org.apache.ctakes.core.cc.FilesInDirectoryCasConsumer
        • org.apache.ctakes.core.cc.HtmlTableCasConsumer
        • org.apache.ctakes.core.cc.NormalizedFilesInDirectoryCasConsumer
        • org.apache.ctakes.constituency.parser.uima.co.ParserTreeWriterConsumer
        • org.apache.ctakes.core.cc.pretty.plaintext.PrettyTextWriterUima
        • org.apache.ctakes.core.cc.property.plaintext.PropertyTextWriterUima
        • org.apache.ctakes.smokingstatus.cc.RecordResolutionCasConsumer
        • org.apache.ctakes.core.cc.SentenceTokensPrinter
        • org.apache.ctakes.sideeffect.cc.SideEffectCasConsumer
        • org.apache.ctakes.sideeffect.cc.SideEffectSentenceCasConsumer
        • org.apache.ctakes.core.cc.TokenFreqCasConsumer
        • org.apache.ctakes.core.cc.TokenOffsetsCasConsumer
      • org.apache.uima.collection.CollectionReader_ImplBase (implements org.apache.uima.collection.CollectionReader)
        • org.apache.uima.fit.component.CasCollectionReader_ImplBase
          • org.apache.ctakes.core.cr.LuceneCollectionReader
        • org.apache.ctakes.ytex.uima.DBCollectionReader
        • org.apache.ctakes.dependency.parser.cr.DependencyFileCollectionReader
        • org.apache.ctakes.core.cr.FilesInDirectoryCollectionReader
          • org.apache.ctakes.core.cr.FilesInDirectoryCollectionCyclicalReads
        • org.apache.ctakes.assertion.cr.I2B2Challenge2010CollectionReader
        • org.apache.uima.fit.component.JCasCollectionReader_ImplBase
          • org.apache.ctakes.core.cr.FileTreeReader
          • org.apache.ctakes.core.cr.TextReader
          • org.apache.ctakes.assertion.eval.XMIReader
          • org.apache.ctakes.core.cr.XMIReader
          • org.apache.ctakes.dependency.parser.ae.util.XMIReader
          • org.apache.ctakes.relationextractor.eval.XMIReader
        • org.apache.ctakes.core.cr.JdbcCollectionReader
        • org.apache.ctakes.core.cr.LinesFromFileCollectionReader
        • org.apache.ctakes.assertion.cr.NegExCorpusReader
        • org.apache.ctakes.postagger.OpenNLPPOSCollectionReader
        • org.apache.ctakes.assertion.cr.XmiCollectionReaderCtakes
        • org.apache.ctakes.core.cr.XmiCollectionReaderCtakes
  • org.apache.ctakes.typesystem.type.relation.ResultOf
  • org.apache.ctakes.typesystem.type.relation.ResultOf
  • org.apache.ctakes.typesystem.type.relation.ResultOf
  • org.apache.ctakes.typesystem.type.relation.ResultOf_Type
  • org.apache.ctakes.typesystem.type.relation.ResultOf_Type
  • org.apache.ctakes.typesystem.type.relation.ResultOf_Type
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation_Type
  • org.apache.ctakes.ytex.R.RGramMatrixExporterImpl (implements org.apache.ctakes.ytex.R.RGramMatrixExporter)
  • org.apache.ctakes.gui.pipeline.bit.info.RoleRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.RomanNumeralFSM
  • org.apache.ctakes.drugner.elements.RouteElement
  • org.apache.ctakes.drugner.fsm.machines.elements.RouteFSM
  • org.apache.ctakes.ytex.kernel.RRFtoWideTab
  • org.apache.ctakes.temporal.utils.RunCorpusDiagnostics
  • org.apache.ctakes.assertion.pipelines.RunJudgeAttributeInstances
  • org.apache.ctakes.assertion.pipelines.RunJudgeAttributeInstances.Options
  • org.mitre.medfacts.uima.RunZoner
  • org.apache.ctakes.coreference.ae.features.SalienceFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.syntax.SBAR
  • org.apache.ctakes.typesystem.type.syntax.SBAR
  • org.apache.ctakes.typesystem.type.syntax.SBAR
  • org.apache.ctakes.typesystem.type.syntax.SBAR_Type
  • org.apache.ctakes.typesystem.type.syntax.SBAR_Type
  • org.apache.ctakes.typesystem.type.syntax.SBAR_Type
  • org.apache.ctakes.jdl.data.xml.SchemaUtil
  • org.apache.ctakes.assertion.stub.ScopeParser
  • org.apache.ctakes.ytex.web.search.SearchConfigBean
  • org.apache.ctakes.utils.wiki.SearchResult
  • org.apache.ctakes.coreference.ae.features.SectionFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.SectionHeaderExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.SectionHeaderRelationExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.textspan.Segment
  • org.apache.ctakes.typesystem.type.textspan.Segment
  • org.apache.ctakes.typesystem.type.textspan.Segment
  • org.apache.ctakes.typesystem.type.textspan.Segment_Type
  • org.apache.ctakes.typesystem.type.textspan.Segment_Type
  • org.apache.ctakes.typesystem.type.textspan.Segment_Type
  • org.apache.ctakes.preprocessor.SegmentMetaData
  • org.apache.ctakes.ytex.uima.model.SegmentRegex (implements java.io.Serializable)
  • org.apache.ctakes.ytex.uima.dao.SegmentRegexDaoImpl (implements org.apache.ctakes.ytex.uima.dao.SegmentRegexDao)
  • org.apache.ctakes.relationextractor.pipelines.SelectiveRelationAnnotationViewer
  • org.apache.ctakes.relationextractor.pipelines.SelectiveRelationAnnotationViewer.Options
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument_Type
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument_Type
  • org.apache.ctakes.typesystem.type.textsem.SemanticArgument_Type
  • org.apache.ctakes.coreference.ae.features.salience.SemanticEnvironmentFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation_Type
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation_Type
  • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation_Type
  • org.apache.ctakes.ytex.web.search.SemanticSearchBean (implements java.io.Serializable)
  • org.apache.ctakes.ytex.web.search.SemanticSimBean (implements java.io.Serializable)
  • org.apache.ctakes.ytex.web.search.SemanticSimBean.SimilarityEntry (implements java.io.Serializable)
  • org.apache.ctakes.ytex.web.search.SemanticSimRegistryBean
  • org.apache.ctakes.ytex.web.search.SemanticSimServiceBean
  • org.apache.ctakes.dictionary.lookup2.util.SemanticUtil
  • org.apache.ctakes.ytex.semil.SemiLFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.typesystem.type.textspan.Sentence
  • org.apache.ctakes.typesystem.type.textspan.Sentence
  • org.apache.ctakes.typesystem.type.textspan.Sentence
  • org.apache.ctakes.typesystem.type.textspan.Sentence_Type
  • org.apache.ctakes.typesystem.type.textspan.Sentence_Type
  • org.apache.ctakes.typesystem.type.textspan.Sentence_Type
  • org.apache.ctakes.core.sentence.SentenceDetectorCtakes
  • org.apache.ctakes.core.sentence.SentenceSpan
  • org.apache.ctakes.ytex.uima.annotators.SentenceSpan
  • org.apache.ctakes.ytex.tools.SetupAuiFirstWord
  • org.apache.ctakes.dictionary.lookup.filter.SetValuePostLookupFilterImpl (implements org.apache.ctakes.dictionary.lookup.MetaDataHitConst, org.apache.ctakes.dictionary.lookup.filter.PostLookupFilter)
  • org.apache.ctakes.sideeffect.util.SEUtil
  • org.apache.ctakes.typesystem.type.refsem.Severity
  • org.apache.ctakes.typesystem.type.refsem.Severity
  • org.apache.ctakes.typesystem.type.refsem.Severity
  • org.apache.ctakes.typesystem.type.refsem.Severity_Type
  • org.apache.ctakes.typesystem.type.refsem.Severity_Type
  • org.apache.ctakes.typesystem.type.refsem.Severity_Type
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.SeverityModifier_Type
  • org.apache.ctakes.ytex.svmlight.SGTFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.assertion.pipelines.SharpCorpusSplit
  • org.apache.ctakes.core.util.SHARPKnowtatorXMLDefaults
  • org.apache.ctakes.relationextractor.eval.SHARPXMI
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom_Type
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom_Type
  • org.apache.ctakes.typesystem.type.refsem.SignSymptom_Type
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention_Type
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention_Type
  • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention_Type
  • org.apache.lucene.search.similarities.Similarity
    • org.apache.lucene.search.similarities.TFIDFSimilarity
      • org.apache.lucene.search.similarities.DefaultSimilarity
        • org.apache.ctakes.utils.wiki.ApproximateSimilarity
  • org.apache.ctakes.ytex.kernel.metric.SimilarityInfo (implements java.io.Serializable)
  • org.apache.ctakes.utils.tree.SimpleTree
  • org.apache.ctakes.ytex.ws.SimServiceInfo
  • org.apache.ctakes.ytex.kernel.SimSvcContextHolder
  • org.apache.ctakes.assertion.stub.SingleDocumentProcessor
    • org.apache.ctakes.assertion.medfacts.i2b2.api.SingleDocumentProcessorCtakes
  • org.apache.ctakes.jdl.common.Singleton
  • org.apache.ctakes.temporal.utils.SMOTEplus
  • org.apache.ctakes.temporal.utils.SoftMaxUtil
  • org.apache.ctakes.ytex.kernel.dao.SortedSetUserType
  • org.apache.ctakes.typesystem.type.structured.SourceData
  • org.apache.ctakes.typesystem.type.structured.SourceData
  • org.apache.ctakes.typesystem.type.structured.SourceData
  • org.apache.ctakes.typesystem.type.structured.SourceData_Type
  • org.apache.ctakes.typesystem.type.structured.SourceData_Type
  • org.apache.ctakes.typesystem.type.structured.SourceData_Type
  • org.apache.ctakes.core.util.SourceMetadataUtil
  • org.apache.ctakes.gui.dictionary.umls.SourceTableModel (implements javax.swing.table.TableModel)
  • org.apache.ctakes.assertion.cr.Span
  • org.apache.ctakes.coreference.eval.helpers.Span
  • org.apache.ctakes.relationextractor.knowtator.Span
  • org.apache.ctakes.coreference.eval.helpers.SpanAlignment
  • org.apache.ctakes.dictionary.lookup2.term.SpannedRareWordTerm
  • org.apache.ctakes.coreference.eval.helpers.SpanOffsetComparator (implements java.util.Comparator<T>)
  • org.apache.ctakes.ytex.kernel.SparseData
  • org.apache.ctakes.ytex.kernel.SparseDataExporterImpl (implements org.apache.ctakes.ytex.kernel.SparseDataExporter)
  • org.apache.ctakes.ytex.sparsematrix.SparseMatrixFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.temporal.ae.feature.SpecialAnnotationRelationExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.relationextractor.data.Splitter
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.SRLFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.SRLRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.dependency.parser.util.SRLUtility
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency_Type
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency_Type
  • org.apache.ctakes.typesystem.type.syntax.StanfordDependency_Type
  • org.apache.ctakes.drugner.elements.StartDateElement
  • net.openai.util.fsm.State (implements java.io.Serializable)
    • org.apache.ctakes.core.fsm.state.NamedState
      • org.apache.ctakes.drugner.fsm.states.util.IndentStartState
      • org.apache.ctakes.core.fsm.state.NonTerminalEndState
  • org.apache.ctakes.relationextractor.data.Stats
  • org.apache.ctakes.core.fsm.machine.StatusIndicatorFSM
  • org.apache.ctakes.drugner.fsm.machines.util.StatusIndicatorFSM
  • org.apache.ctakes.ytex.uima.lookup.ae.StemmedLookupAnnotationToJCasAdapter (implements org.apache.ctakes.dictionary.lookup.vo.LookupAnnotation, org.apache.ctakes.dictionary.lookup.vo.LookupToken)
  • org.apache.ctakes.drugner.elements.StrengthElement
  • org.apache.ctakes.drugner.fsm.machines.elements.StrengthFSM
  • org.apache.ctakes.drugner.elements.StrengthUnitElement
  • org.apache.ctakes.drugner.fsm.machines.elements.StrengthUnitFSM
  • org.apache.ctakes.ytex.kernel.dao.StringArrayUserType (implements org.hibernate.usertype.UserType)
  • org.apache.ctakes.assertion.stub.StringHandling
  • org.apache.ctakes.core.resource.StringIntegerMapResourceImpl (implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.StringIntegerMapResource)
  • org.apache.ctakes.core.resource.StringMapResourceImpl (implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.StringMapResource)
  • org.apache.ctakes.coreference.ae.features.StringMatchingFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.dictionary.lookup.filter.StringPreLookupFilterImpl (implements org.apache.ctakes.dictionary.lookup.filter.PreLookupFilter)
  • org.apache.ctakes.dictionary.lookup.strtable.StringTable
  • org.apache.ctakes.dictionary.lookup.strtable.StringTableFactory
  • org.apache.ctakes.dictionary.lookup.strtable.StringTableRow
  • org.apache.ctakes.assertion.attributes.subject.SubjectAttributeClassifier
  • org.apache.ctakes.assertion.attributes.features.SubjectFeaturesExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.SubjectModifier_Type
  • org.apache.ctakes.drugner.fsm.machines.util.SubSectionIndicatorFSM (implements org.apache.ctakes.core.fsm.machine.FSM)
  • org.apache.ctakes.drugner.fsm.machines.util.SuffixFrequencyFSM
  • org.apache.ctakes.drugner.fsm.machines.util.SuffixStrengthFSM
  • org.apache.ctakes.core.cleartk.SumContext (implements org.cleartk.ml.feature.extractor.CleartkExtractor.Context)
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.SurroundingExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.ytex.svmlight.SVMLightFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.ytex.kernel.SVMLinFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.coreference.util.SvmUtils
  • org.apache.ctakes.coreference.util.SvmVectorCreator
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken_Type
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken_Type
  • org.apache.ctakes.typesystem.type.syntax.SymbolToken_Type
  • org.apache.ctakes.ytex.kernel.evaluator.SymmetricPairCacheKeyGenerator (implements org.apache.ctakes.ytex.kernel.evaluator.CacheKeyGenerator)
  • org.apache.ctakes.temporal.ae.feature.SyntacticParentFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.treekernel.SyntaticSingleTreeExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.postagger.TagDictionaryCreator
  • org.apache.ctakes.temporal.ae.feature.TemporalAttributeFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.TemporalAttributeForMixEventTimeExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.pipelines.TemporalExtractionPipeline_ImplBase
    • org.apache.ctakes.temporal.pipelines.EventAndTimeExtractionPipeline
    • org.apache.ctakes.temporal.pipelines.EventExtractionPipeline
    • org.apache.ctakes.temporal.data.analysis.ExtractDoctimerelPairProbabilities
    • org.apache.ctakes.temporal.pipelines.FullTemporalExtractionPipeline
    • org.apache.ctakes.temporal.pipelines.TimeExtractionPipeline
  • org.apache.ctakes.coreference.ae.features.TemporalFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.treekernel.TemporalFTExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.treekernel.TemporalPathExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.treekernel.TemporalPETExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.TemporalPETFlatExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation_Type
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation_Type
  • org.apache.ctakes.typesystem.type.relation.TemporalRelation_Type
  • org.apache.ctakes.temporal.ae.TemporalRelationExtractorAnnotator.IdentifiedAnnotationPair
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation_Type
  • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation_Type
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode_Type
  • org.apache.ctakes.coreference.eval.helpers.Test
  • org.apache.ctakes.assertion.train.TestAttributeModels
  • org.apache.ctakes.utils.wiki.TestCosineSimilarity
  • org.apache.ctakes.preprocessor.test.TestDriver
  • org.apache.ctakes.utils.test.TestUtil
  • org.apache.ctakes.coreference.util.TextMatch
  • org.apache.ctakes.drugner.elements.TextMentionElement
  • org.apache.ctakes.core.ci.TextModification
  • org.apache.ctakes.gui.dictionary.util.TextTokenizer
  • java.lang.Thread (implements java.lang.Runnable)
    • org.apache.ctakes.coreference.treekernel.training.RowFillerThread
    • org.apache.ctakes.ytex.tools.RunCPE
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.apache.ctakes.dictionary.lookup.DictionaryException
      • org.apache.ctakes.dictionary.lookup.filter.FilterException
  • org.apache.ctakes.temporal.eval.THYMEData
  • org.apache.ctakes.typesystem.type.refsem.Time
  • org.apache.ctakes.typesystem.type.refsem.Time
  • org.apache.ctakes.typesystem.type.refsem.Time
  • org.apache.ctakes.typesystem.type.refsem.Time_Type
  • org.apache.ctakes.typesystem.type.refsem.Time_Type
  • org.apache.ctakes.typesystem.type.refsem.Time_Type
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation_Type
  • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation_Type
  • org.apache.ctakes.core.fsm.machine.TimeFSM
  • org.apache.ctakes.typesystem.type.textsem.TimeMention
  • org.apache.ctakes.typesystem.type.textsem.TimeMention
  • org.apache.ctakes.typesystem.type.textsem.TimeMention
  • org.apache.ctakes.typesystem.type.textsem.TimeMention_Type
  • org.apache.ctakes.typesystem.type.textsem.TimeMention_Type
  • org.apache.ctakes.typesystem.type.textsem.TimeMention_Type
  • org.apache.ctakes.core.util.regex.TimeoutMatcher (implements java.io.Closeable)
  • org.apache.ctakes.temporal.ae.feature.TimeWordTypeExtractor<T> (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.TimeXExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.temporal.ae.feature.TimeXPropertyRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.ae.feature.TimeXRelationFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.temporal.data.analysis.TimexTreeAlignmentStatistics
  • org.apache.ctakes.temporal.utils.TLinkTypeArray2
  • org.apache.ctakes.temporal.utils.TlinkTypeSet (implements java.lang.Iterable<T>)
  • org.apache.ctakes.core.nlp.tokenizer.Token
  • org.apache.ctakes.core.ae.TokenConverter
  • org.apache.ctakes.core.fsm.token.adapter.TokenConverter
  • org.apache.ctakes.coreference.ae.features.TokenFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.relationextractor.ae.features.TokenFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
    • org.apache.ctakes.temporal.ae.feature.NoOtherETPuntInBetweenFeaturesExtractor
    • org.apache.ctakes.temporal.ae.feature.OverlappedHeadFeaturesExtractor
    • org.apache.ctakes.temporal.ae.feature.UMLSBasedTokenFeaturesExtractor
    • org.apache.ctakes.temporal.ae.feature.UnexpandedTokenFeaturesExtractor
  • org.apache.ctakes.core.nlp.tokenizer.Tokenizer
  • org.apache.ctakes.core.nlp.tokenizer.TokenizerHelper
  • org.apache.ctakes.core.nlp.tokenizer.TokenizerPTB
  • org.apache.ctakes.temporal.ae.feature.TokenPropertyFeaturesExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.gui.dictionary.util.TokenUtil
  • org.apache.uima.jcas.cas.TOP_Type
    • org.apache.uima.jcas.cas.AnnotationBase_Type
      • org.apache.uima.jcas.tcas.Annotation_Type
        • org.apache.ctakes.assertion.medfacts.types.Assertion_Type
        • org.apache.ctakes.typesystem.type.temporary.assertion.AssertionCuePhraseAnnotation_Type
        • org.apache.ctakes.smokingstatus.type.libsvm.AttributeValue_Type
          • org.apache.ctakes.smokingstatus.type.libsvm.DateAttributeValue_Type
          • org.apache.ctakes.smokingstatus.type.libsvm.NominalAttributeValue_Type
          • org.apache.ctakes.smokingstatus.type.libsvm.NumericAttributeValue_Type
          • org.apache.ctakes.smokingstatus.type.libsvm.StringAttributeValue_Type
        • org.apache.ctakes.typesystem.type.syntax.BaseToken_Type
          • org.apache.ctakes.typesystem.type.syntax.ContractionToken_Type
          • org.apache.ctakes.typesystem.type.syntax.NewlineToken_Type
          • org.apache.ctakes.typesystem.type.syntax.NumToken_Type
          • org.apache.ctakes.typesystem.type.syntax.PunctuationToken_Type
          • org.apache.ctakes.typesystem.type.syntax.SymbolToken_Type
          • org.apache.ctakes.typesystem.type.syntax.WordToken_Type
        • org.apache.ctakes.constituency.parser.uima.type.BooleanLabeledTree_Type
        • org.apache.ctakes.typesystem.type.syntax.Chunk_Type
          • org.apache.ctakes.typesystem.type.syntax.ADJP_Type
          • org.apache.ctakes.typesystem.type.syntax.ADVP_Type
          • org.apache.ctakes.typesystem.type.syntax.CONJP_Type
          • org.apache.ctakes.typesystem.type.syntax.INTJ_Type
          • org.apache.ctakes.typesystem.type.syntax.LST_Type
          • org.apache.ctakes.typesystem.type.syntax.NP_Type
          • org.apache.ctakes.typesystem.type.syntax.O_Type
          • org.apache.ctakes.typesystem.type.syntax.PP_Type
          • org.apache.ctakes.typesystem.type.syntax.PRT_Type
          • org.apache.ctakes.typesystem.type.syntax.SBAR_Type
          • org.apache.ctakes.typesystem.type.syntax.UCP_Type
          • org.apache.ctakes.typesystem.type.syntax.VP_Type
        • org.apache.ctakes.drugner.type.ChunkAnnotation_Type
        • org.apache.ctakes.assertion.medfacts.types.Concept_Type
        • org.apache.ctakes.typesystem.type.syntax.ConllDependencyNode_Type
        • org.apache.ctakes.ytex.uima.types.Date_Type
        • org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type
        • org.apache.ctakes.ytex.uima.types.DocKey_Type
        • org.apache.ctakes.smokingstatus.type.libsvm.DocumentID_Type
        • org.apache.ctakes.drugner.type.DosagesAnnotation_Type
        • org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type
        • org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type
        • org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type
        • org.apache.ctakes.drugner.type.DurationAnnotation_Type
        • org.apache.ctakes.drugner.type.FormAnnotation_Type
        • org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type
        • org.apache.ctakes.drugner.type.FrequencyAnnotation_Type
        • org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type
        • org.apache.ctakes.assertion.zoner.types.Heading_Type
        • org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.ContextAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.DateAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.EntityMention_Type
            • org.apache.ctakes.typesystem.type.textsem.AnatomicalSiteMention_Type
          • org.apache.ctakes.typesystem.type.textsem.EventMention_Type
            • org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention_Type
            • org.apache.ctakes.typesystem.type.textsem.LabMention_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationEventMention_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationMention_Type
            • org.apache.ctakes.typesystem.type.textsem.ProcedureMention_Type
            • org.apache.ctakes.typesystem.type.textsem.SignSymptomMention_Type
          • org.apache.ctakes.typesystem.type.textsem.FractionAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.Markable_Type
          • org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.Modifier_Type
            • org.apache.ctakes.typesystem.type.textsem.BodyLateralityModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.BodySideModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.ConditionalModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.CourseModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.GenericModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.HistoryOfModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.LabDeltaFlagModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.LabEstimatedModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.LabInterpretationModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.LabReferenceRangeModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.LabValueModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationAllergyModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationDosageModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationDurationModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationFormModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationFrequencyModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationRouteModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationStatusChangeModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.MedicationStrengthModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.PolarityModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.ProcedureDeviceModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.ProcedureMethodModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.SeverityModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.SubjectModifier_Type
            • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier_Type
          • org.apache.ctakes.smokingstatus.type.NonSmokerNamedEntityAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.RangeAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation_Type
          • org.apache.ctakes.smokingstatus.type.SmokerNamedEntityAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.TimeAnnotation_Type
          • org.apache.ctakes.typesystem.type.textsem.TimeMention_Type
          • org.apache.ctakes.smokingstatus.type.UnknownSmokerNamedEntityAnnotation_Type
        • org.apache.ctakes.typesystem.type.textspan.List_Type
        • org.apache.ctakes.typesystem.type.textspan.ListEntry_Type
        • org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation_Type
        • org.apache.ctakes.coreference.type.Markable_Type
          • org.apache.ctakes.coreference.type.DemMarkable_Type
          • org.apache.ctakes.coreference.type.NEMarkable_Type
          • org.apache.ctakes.coreference.type.PronounMarkable_Type
        • org.apache.ctakes.coreference.type.MarkablePairSet_Type
        • org.apache.ctakes.typesystem.type.textspan.Paragraph_Type
        • org.apache.ctakes.typesystem.type.textsem.Predicate_Type
        • org.apache.ctakes.sideeffect.type.PSESentence_Type
        • org.apache.ctakes.sideeffect.type.PSESentenceFeature_Type
        • org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type
        • org.apache.ctakes.smokingstatus.i2b2.type.RecordSentence_Type
        • org.apache.ctakes.drugner.type.RouteAnnotation_Type
        • org.apache.ctakes.typesystem.type.textspan.Segment_Type
        • org.apache.ctakes.typesystem.type.textsem.SemanticArgument_Type
        • org.apache.ctakes.typesystem.type.textspan.Sentence_Type
        • org.apache.ctakes.sideeffect.type.SESentence_Type
        • org.apache.ctakes.sideeffect.type.SideEffectAnnotation_Type
        • org.apache.ctakes.smokingstatus.type.SmokingDocumentClassification_Type
        • org.apache.ctakes.drugner.type.StrengthAnnotation_Type
        • org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type
        • org.apache.ctakes.drugner.type.SubSectionAnnotation_Type
        • org.apache.ctakes.assertion.zoner.types.Subzone_Type
        • org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type
        • org.apache.ctakes.typesystem.type.syntax.TreebankNode_Type
          • org.apache.ctakes.typesystem.type.syntax.TerminalTreebankNode_Type
          • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode_Type
        • org.apache.ctakes.assertion.zoner.types.Zone_Type
    • org.apache.ctakes.coreference.type.BooleanLabeledFS_Type
    • org.apache.ctakes.typesystem.type.structured.Demographics_Type
    • org.apache.ctakes.typesystem.type.structured.DocumentClassification_Type
    • org.apache.ctakes.typesystem.type.structured.DocumentID_Type
    • org.apache.ctakes.typesystem.type.structured.DocumentIdPrefix_Type
    • org.apache.ctakes.typesystem.type.structured.DocumentPath_Type
    • org.apache.ctakes.typesystem.type.refsem.Element_Type
      • org.apache.ctakes.typesystem.type.refsem.Attribute_Type
        • org.apache.ctakes.typesystem.type.refsem.BodyLaterality_Type
        • org.apache.ctakes.typesystem.type.refsem.BodySide_Type
        • org.apache.ctakes.typesystem.type.refsem.Course_Type
        • org.apache.ctakes.typesystem.type.refsem.LabDeltaFlag_Type
        • org.apache.ctakes.typesystem.type.refsem.LabReferenceRange_Type
        • org.apache.ctakes.typesystem.type.refsem.LabValue_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationDosage_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationDuration_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationForm_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationFrequency_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationRoute_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationStatusChange_Type
        • org.apache.ctakes.typesystem.type.refsem.MedicationStrength_Type
        • org.apache.ctakes.typesystem.type.refsem.ProcedureDevice_Type
        • org.apache.ctakes.typesystem.type.refsem.ProcedureMethod_Type
        • org.apache.ctakes.typesystem.type.refsem.Severity_Type
      • org.apache.ctakes.typesystem.type.refsem.Date_Type
      • org.apache.ctakes.typesystem.type.refsem.Entity_Type
        • org.apache.ctakes.typesystem.type.refsem.AnatomicalSite_Type
      • org.apache.ctakes.typesystem.type.refsem.Event_Type
        • org.apache.ctakes.typesystem.type.refsem.DiseaseDisorder_Type
        • org.apache.ctakes.typesystem.type.refsem.Lab_Type
        • org.apache.ctakes.typesystem.type.refsem.Medication_Type
        • org.apache.ctakes.typesystem.type.refsem.Procedure_Type
        • org.apache.ctakes.typesystem.type.refsem.SignSymptom_Type
      • org.apache.ctakes.typesystem.type.refsem.Time_Type
    • org.apache.ctakes.typesystem.type.refsem.EventProperties_Type
    • org.apache.ctakes.ytex.uima.types.KeyValuePair_Type
    • org.apache.ctakes.typesystem.type.syntax.Lemma_Type
    • org.apache.ctakes.coreference.type.MarkablePair_Type
    • org.apache.ctakes.typesystem.type.structured.Metadata_Type
    • org.apache.ctakes.typesystem.type.refsem.OntologyConcept_Type
      • org.apache.ctakes.typesystem.type.refsem.UmlsConcept_Type
    • org.apache.ctakes.coreference.type.Pair_Type
    • org.apache.ctakes.typesystem.type.util.Pair_Type
    • org.apache.ctakes.typesystem.type.util.Pairs_Type
      • org.apache.ctakes.typesystem.type.util.ProbabilityDistribution_Type
    • org.apache.ctakes.typesystem.type.relation.Relation_Type
      • org.apache.ctakes.typesystem.type.relation.AttributeRelation_Type
        • org.apache.ctakes.typesystem.type.relation.DegreeOf_Type
      • org.apache.ctakes.typesystem.type.relation.BinaryTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.AffectsTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.AspectualTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.CausesBringsAboutTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.ComplicatesDisruptsTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.ContraindicatesTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.CoreferenceRelation_Type
        • org.apache.ctakes.typesystem.type.relation.DegreeOfTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.DiagnosesTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.IndicatesTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.IsIndicatedForTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.LocationOfTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.ManagesTreatsTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.ManifestationOfTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.PreventsTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.ResultOfTextRelation_Type
        • org.apache.ctakes.typesystem.type.syntax.StanfordDependency_Type
        • org.apache.ctakes.typesystem.type.relation.TemporalTextRelation_Type
        • org.apache.ctakes.typesystem.type.relation.UMLSRelation_Type
      • org.apache.ctakes.typesystem.type.relation.CollectionTextRelation_Type
      • org.apache.ctakes.typesystem.type.relation.CollectionTextRelationIdentifiedAnnotationRelation_Type
      • org.apache.ctakes.typesystem.type.relation.ElementRelation_Type
        • org.apache.ctakes.typesystem.type.relation.Affects_Type
        • org.apache.ctakes.typesystem.type.relation.CausesBringsAbout_Type
        • org.apache.ctakes.typesystem.type.relation.ComplicatesDisrupts_Type
        • org.apache.ctakes.typesystem.type.relation.Contraindicates_Type
        • org.apache.ctakes.typesystem.type.relation.Diagnoses_Type
        • org.apache.ctakes.typesystem.type.relation.Indicates_Type
        • org.apache.ctakes.typesystem.type.relation.IsIndicatedFor_Type
        • org.apache.ctakes.typesystem.type.relation.LocationOf_Type
        • org.apache.ctakes.typesystem.type.relation.ManagesTreats_Type
        • org.apache.ctakes.typesystem.type.relation.ManifestationOf_Type
        • org.apache.ctakes.typesystem.type.relation.Prevents_Type
        • org.apache.ctakes.typesystem.type.relation.ResultOf_Type
        • org.apache.ctakes.typesystem.type.relation.TemporalRelation_Type
      • org.apache.ctakes.typesystem.type.textsem.SemanticRoleRelation_Type
    • org.apache.ctakes.typesystem.type.relation.RelationArgument_Type
    • org.apache.ctakes.typesystem.type.structured.SourceData_Type
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TopTreebankNode_Type
  • org.cleartk.ml.feature.transform.TrainableExtractor_ImplBase<OUTCOME_T> (implements org.cleartk.ml.feature.transform.TrainableExtractor<OUTCOME_T>)
    • org.apache.ctakes.assertion.attributes.features.selection.FeatureSelection<OUTCOME_T> (implements com.google.common.base.Predicate<T>)
      • org.apache.ctakes.assertion.attributes.features.selection.Chi2FeatureSelection<OUTCOME_T>
      • org.apache.ctakes.assertion.attributes.features.selection.MutualInformationFeatureSelection<OUTCOME_T>
    • org.apache.ctakes.temporal.ae.feature.selection.FeatureSelection<OUTCOME_T> (implements com.google.common.base.Predicate<T>)
      • org.apache.ctakes.temporal.ae.feature.selection.BinaryAlphaFeatureSelection<OUTCOME_T>
      • org.apache.ctakes.temporal.ae.feature.selection.Chi2FeatureSelection<OUTCOME_T>
      • org.apache.ctakes.temporal.ae.feature.selection.MutualInformationFeatureSelection<OUTCOME_T>
      • org.apache.ctakes.temporal.ae.feature.selection.OddsRatioFeatureSelection<OUTCOME_T>
  • org.apache.ctakes.assertion.medfacts.cleartk.TrainAssertionModel
  • org.apache.ctakes.assertion.train.TrainAttributeModels
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode_Type
  • org.apache.ctakes.typesystem.type.syntax.TreebankNode_Type
  • org.apache.ctakes.constituency.parser.treekernel.TreeExtractor
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.TreeFragmentFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
    • org.apache.ctakes.assertion.medfacts.cleartk.extractors.AboveLeftFragmentExtractor
    • org.apache.ctakes.assertion.medfacts.cleartk.extractors.AboveRightFragmentExtractor
    • org.apache.ctakes.assertion.medfacts.cleartk.extractors.DependencyWordsFragmentExtractor
  • org.apache.ctakes.relationextractor.ae.features.TreeFragmentFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.treekernel.training.TreeKernelTrainer (implements org.apache.ctakes.coreference.util.ThreadDelegator)
  • org.apache.ctakes.ytex.kernel.tree.TreeMappingInfo
  • org.apache.ctakes.ytex.kernel.evaluator.TreePrinter
  • org.apache.ctakes.constituency.parser.util.TreeUtils
  • org.apache.ctakes.dictionary.lookup.filter.TruncateCollectionFilterImpl (implements org.apache.ctakes.dictionary.lookup.filter.CollectionFilter)
  • org.apache.ctakes.smokingstatus.util.TruthValue
  • org.apache.ctakes.gui.dictionary.umls.TuiCellRenderer (implements javax.swing.table.TableCellRenderer)
  • org.apache.ctakes.dictionary.lookup2.util.TuiCodeUtil
  • org.apache.ctakes.gui.dictionary.umls.TuiTableModel (implements javax.swing.table.TableModel)
  • org.apache.ctakes.gui.pipeline.bit.info.TypeProductListModel (implements javax.swing.ListModel<E>)
  • org.apache.ctakes.gui.pipeline.bit.info.TypeProductRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.typesystem.type.syntax.UCP
  • org.apache.ctakes.typesystem.type.syntax.UCP
  • org.apache.ctakes.typesystem.type.syntax.UCP
  • org.apache.ctakes.typesystem.type.syntax.UCP_Type
  • org.apache.ctakes.typesystem.type.syntax.UCP_Type
  • org.apache.ctakes.typesystem.type.syntax.UCP_Type
  • org.apache.ctakes.ytex.uima.model.UimaType (implements java.io.Serializable)
  • org.apache.ctakes.ytex.umls.model.UmlsAuiFirstWord (implements java.io.Serializable)
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept_Type
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept_Type
  • org.apache.ctakes.typesystem.type.refsem.UmlsConcept_Type
  • org.apache.ctakes.ytex.umls.dao.UMLSDaoImpl (implements org.apache.ctakes.ytex.umls.dao.UMLSDao)
  • org.apache.ctakes.temporal.ae.feature.UmlsFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.coreference.ae.features.UMLSFeatureExtractor (implements org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>)
  • org.apache.ctakes.dictionary.lookup2.concept.UmlsJdbcConceptFactory (implements org.apache.ctakes.dictionary.lookup2.concept.ConceptFactory)
  • org.apache.ctakes.dictionary.lookup2.dictionary.UmlsJdbcRareWordDictionary (implements org.apache.ctakes.dictionary.lookup2.dictionary.RareWordDictionary)
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation_Type
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation_Type
  • org.apache.ctakes.typesystem.type.relation.UMLSRelation_Type
  • org.apache.ctakes.temporal.ae.feature.UmlsSingleFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.gui.dictionary.umls.UmlsTermUtil
  • org.apache.ctakes.assertion.medfacts.cleartk.extractors.UncertaintyFeatureExtractor (implements org.cleartk.ml.feature.extractor.FeatureExtractor1<T>)
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier_Type
  • org.apache.ctakes.typesystem.type.textsem.UncertaintyModifier_Type
  • org.apache.ctakes.gui.pipeline.bit.user.UserBitRenderer (implements javax.swing.ListCellRenderer<E>)
  • org.apache.ctakes.preprocessor.Utility
  • org.apache.ctakes.relationextractor.ae.baselines.Utils
  • org.apache.ctakes.relationextractor.data.analysis.Utils
  • org.apache.ctakes.temporal.duration.Utils
  • org.apache.ctakes.relationextractor.data.analysis.Utils.Callback (implements com.google.common.io.LineProcessor<T>)
  • org.apache.ctakes.temporal.duration.Utils.Callback (implements com.google.common.io.LineProcessor<T>)
  • org.apache.ctakes.jdl.data.xml.Validation
  • org.apache.ctakes.dictionary.lookup.phrasebuilder.VariantPhraseBuilderImpl (implements org.apache.ctakes.dictionary.lookup.phrasebuilder.PhraseBuilder)
  • org.apache.ctakes.typesystem.type.syntax.VP
  • org.apache.ctakes.typesystem.type.syntax.VP
  • org.apache.ctakes.typesystem.type.syntax.VP
  • org.apache.ctakes.typesystem.type.syntax.VP_Type
  • org.apache.ctakes.typesystem.type.syntax.VP_Type
  • org.apache.ctakes.typesystem.type.syntax.VP_Type
  • org.apache.ctakes.ytex.kernel.evaluator.WeightedPolynomialMixingKernel (implements org.springframework.beans.factory.InitializingBean, org.apache.ctakes.ytex.kernel.evaluator.Kernel)
  • org.apache.ctakes.ytex.weka.WekaAttributeEvaluatorImpl (implements org.apache.ctakes.ytex.weka.WekaAttributeEvaluator)
  • org.apache.ctakes.ytex.weka.WekaFormatterFactory (implements org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory)
  • org.apache.ctakes.ytex.weka.WekaResultsImporterImpl (implements org.apache.ctakes.ytex.weka.WekaResultsImporter)
  • org.apache.ctakes.ytex.weka.WekaResultsImporterImpl.ClassifierEvaluationInstanceImporter (implements org.apache.ctakes.ytex.weka.WekaResultInstanceImporter)
  • org.apache.ctakes.utils.wiki.WikiIndex
  • org.apache.ctakes.utils.distsem.WordEmbeddings
  • org.apache.ctakes.relationextractor.ae.features.WordNetFeatureExtractor
  • org.apache.ctakes.relationextractor.ae.features.WordNetUtils
  • org.apache.ctakes.ytex.kernel.wsd.WordSenseDisambiguatorImpl (implements org.apache.ctakes.ytex.kernel.wsd.WordSenseDisambiguator)
  • org.apache.ctakes.typesystem.type.syntax.WordToken
  • org.apache.ctakes.typesystem.type.syntax.WordToken
  • org.apache.ctakes.typesystem.type.syntax.WordToken
  • org.apache.ctakes.typesystem.type.syntax.WordToken_Type
  • org.apache.ctakes.typesystem.type.syntax.WordToken_Type
  • org.apache.ctakes.typesystem.type.syntax.WordToken_Type
  • org.apache.ctakes.core.util.WordTokenUtil
  • org.apache.ctakes.utils.distsem.WordVector
  • org.apache.ctakes.utils.distsem.WordVectorReader
  • org.apache.ctakes.dependency.parser.ae.util.WriteClearNLPDescriptors
  • org.apache.ctakes.dependency.parser.ae.util.WriteClearNLPDescriptors.Options
  • org.apache.ctakes.utils.xcas_comparison.XcasAnnotation (implements java.lang.Cloneable, java.lang.Comparable<T>)
  • org.apache.ctakes.utils.xcas_comparison.XcasDiff
  • org.apache.ctakes.utils.xcas_comparison.XcasFile (implements java.lang.Cloneable)
  • org.apache.ctakes.core.cc.XMISerializer
  • org.apache.ctakes.jdl.schema.xdl.XmlLoadType
    • org.apache.ctakes.jdl.schema.xdl.LoadType.Xml
  • org.apache.ctakes.assertion.cr.XMLReader
  • org.apache.ctakes.relationextractor.knowtator.XMLReader
  • org.apache.ctakes.temporal.ae.feature.selection.ZscoreNormalizationExtractor.ZscoreRunningStat (implements java.io.Serializable)

Interface Hierarchy

• org.apache.ctakes.core.cc.AbstractJdbcWriter.FieldInfo
• org.apache.ctakes.core.cc.AbstractJdbcWriter.TableInfo
• org.apache.uima.analysis_component.AnalysisComponent
  • org.apache.ctakes.dictionary.lookup2.ae.JCasTermAnnotator
• org.apache.ctakes.coreference.ae.pairing.AnnotationPairer<MENTION_TYPE,PAIR_TYPE>
• org.apache.ctakes.ytex.kernel.BagOfWordsDecorator
• org.apache.ctakes.ytex.kernel.BagOfWordsExporter
  • org.apache.ctakes.ytex.weka.WekaBagOfWordsExporter
• org.apache.ctakes.core.fsm.token.BaseToken
  • org.apache.ctakes.core.fsm.token.CharacterToken
    • org.apache.ctakes.core.fsm.token.PunctuationToken
    • org.apache.ctakes.core.fsm.token.SymbolToken
  • org.apache.ctakes.core.fsm.token.ContractionToken
  • org.apache.ctakes.core.fsm.token.DecimalToken
  • org.apache.ctakes.core.fsm.token.EolToken
  • org.apache.ctakes.core.fsm.token.IntegerToken
  • org.apache.ctakes.core.fsm.token.NumberToken
    • org.apache.ctakes.core.fsm.token.DecimalToken
  • org.apache.ctakes.core.fsm.token.PunctuationToken
  • org.apache.ctakes.core.fsm.token.SymbolToken
  • org.apache.ctakes.core.fsm.token.TextToken
    • org.apache.ctakes.core.fsm.token.WordToken
  • org.apache.ctakes.core.fsm.token.WordToken
• org.apache.ctakes.ytex.kernel.evaluator.CacheKeyGenerator
• org.apache.uima.collection.base_cpm.CasProcessor
  • org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor, org.apache.uima.resource.ConfigurableResource)
    • org.apache.ctakes.core.cc.NonTerminalConsumer
  • org.apache.uima.collection.base_cpm.CasObjectProcessor
    • org.apache.uima.collection.CasConsumer (also extends org.apache.uima.resource.ConfigurableResource)
      • org.apache.ctakes.core.cc.NonTerminalConsumer
    • org.apache.ctakes.core.cc.NonTerminalConsumer
  • org.apache.ctakes.core.cc.NonTerminalConsumer
• org.apache.ctakes.assertion.stub.CharacterOffsetToLineTokenConverter
• org.apache.ctakes.chunker.ae.ChunkCreator
• org.apache.ctakes.ytex.kernel.dao.ClassifierEvaluationDao
• org.apache.ctakes.ytex.kernel.ClassifierEvaluationParser
• org.apache.ctakes.core.util.collection.CollectionCreator<V,T>
• org.apache.ctakes.dictionary.lookup.filter.CollectionFilter
• org.apache.ctakes.dictionary.lookup2.concept.Concept
• org.apache.ctakes.ytex.kernel.dao.ConceptDao
• org.apache.ctakes.dictionary.lookup2.concept.ConceptFactory
• org.apache.ctakes.ytex.web.search.ConceptSearchService
• org.apache.ctakes.ytex.ws.ConceptSimilarityRestService
• org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityService
• org.apache.ctakes.ytex.ws.ConceptSimilarityWebService
• org.apache.ctakes.smokingstatus.Const
• org.apache.ctakes.necontexts.ContextAnalyzer
• org.apache.ctakes.necontexts.ContextHitConsumer
• org.apache.ctakes.ytex.kernel.evaluator.CorpusKernelEvaluator
• org.apache.ctakes.ytex.kernel.CytoscapeHelper
• org.apache.ctakes.dictionary.lookup.Dictionary
• org.apache.ctakes.dictionary.lookup2.util.DictionarySpec
• org.apache.ctakes.ytex.uima.dao.DocumentDao
• org.apache.ctakes.ytex.uima.mapper.DocumentMapperService
• org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl.ChunkPreparedStatementSetter<T>
• org.apache.ctakes.ytex.web.search.DocumentSearchService
• org.apache.ctakes.drugner.DrugModel
• org.apache.ctakes.temporal.eval.Evaluation_ImplBase.Options
  • org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations_ImplBase.TempRelOptions
• org.apache.ctakes.dictionary.lookup.strtable.FieldConstraint
• org.apache.ctakes.core.resource.FileResource
• org.apache.ctakes.ytex.kernel.FoldGenerator
• org.apache.ctakes.core.fsm.machine.FSM
• org.apache.ctakes.ytex.weka.GramMatrixExporter
• org.apache.ctakes.gui.action.HotKeyManager
• org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluator
• org.apache.ctakes.ytex.kernel.InfoContentEvaluator
• org.apache.ctakes.ytex.sparsematrix.InstanceDataExporter
• org.apache.ctakes.ytex.kernel.tree.InstanceTreeBuilder
• org.apache.ctakes.ytex.kernel.IntrinsicInfoContentEvaluator
• org.apache.ctakes.core.cc.pretty.cell.ItemCell
  • org.apache.ctakes.core.cc.pretty.cell.BaseItemCell
  • org.apache.ctakes.core.cc.pretty.cell.UmlsItemCell
• org.apache.ctakes.core.cc.pretty.row.ItemRow
• java.lang.Iterable<T>
  • org.apache.ctakes.core.util.collection.CollectionMap<K,V,T> (also extends java.util.Map<K,V>)
• org.apache.ctakes.core.resource.JdbcConnectionResource
• org.apache.ctakes.ytex.kernel.evaluator.Kernel
• org.apache.ctakes.ytex.kernel.dao.KernelEvaluationDao
• org.apache.ctakes.ytex.kernel.KernelUtil
• org.apache.ctakes.ytex.libsvm.LibSVMGramMatrixExporter
• org.apache.ctakes.ytex.libsvm.LibSVMUtil
• org.apache.ctakes.dictionary.lookup.algorithms.LookupAlgorithm
• org.apache.ctakes.dictionary.lookup.vo.LookupAnnotation
  • org.apache.ctakes.dictionary.lookup.vo.LookupToken
• org.apache.ctakes.dictionary.lookup.ae.LookupConsumer
• org.apache.ctakes.dictionary.lookup.ae.LookupInitializer
• org.apache.ctakes.core.resource.LuceneIndexReaderResource
• org.apache.ctakes.lvg.resource.LvgCmdApiResource
• java.util.Map<K,V>
  • org.apache.ctakes.core.util.collection.CollectionMap<K,V,T> (also extends java.lang.Iterable<T>)
• org.apache.ctakes.dictionary.lookup.MetaDataHit
• org.apache.ctakes.dictionary.lookup.MetaDataHitConst
• org.apache.ctakes.ytex.uima.dao.NamedEntityRegexDao
• org.apache.ctakes.ytex.uima.annotators.NegexAnnotator.TargetAnnoFilter
• org.apache.ctakes.ytex.kernel.pagerank.PageRankService
• org.apache.ctakes.gui.pipeline.bit.parameter.ParameterHolder
  • org.apache.ctakes.gui.pipeline.bit.user.UserBit
• org.apache.ctakes.constituency.parser.ParserWrapper
• org.apache.ctakes.dictionary.lookup.phrasebuilder.PhraseBuilder
• org.apache.ctakes.dictionary.lookup.filter.PostLookupFilter
• org.apache.ctakes.dictionary.lookup.filter.PreLookupFilter
• org.apache.ctakes.preprocessor.PreProcessor
• org.apache.ctakes.dictionary.lookup2.dictionary.RareWordDictionary
• org.apache.ctakes.relationextractor.ae.features.RelationFeaturesExtractor<T1,T2>
• org.apache.uima.resource.Resource
  • org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor, org.apache.uima.resource.ConfigurableResource)
    • org.apache.ctakes.core.cc.NonTerminalConsumer
  • org.apache.uima.resource.ConfigurableResource
    • org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor)
      • org.apache.ctakes.core.cc.NonTerminalConsumer
    • org.apache.ctakes.core.cc.NonTerminalConsumer
  • org.apache.ctakes.core.cc.NonTerminalConsumer
• org.apache.ctakes.ytex.R.RGramMatrixExporter
• org.apache.ctakes.ytex.uima.dao.SegmentRegexDao
• org.apache.ctakes.relationextractor.eval.SHARPXMI.Options
  • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.Options
  • org.apache.ctakes.relationextractor.eval.SHARPXMI.EvaluationOptions
    • org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.Options
• org.apache.ctakes.ytex.kernel.metric.SimilarityMetric
• org.apache.ctakes.ytex.kernel.SparseDataExporter
• org.apache.ctakes.ytex.kernel.SparseDataFormatter
• org.apache.ctakes.ytex.kernel.SparseDataFormatterFactory
• org.apache.ctakes.core.pipeline.StandardCliOptions
  • org.apache.ctakes.core.pipeline.CliOptionals
• org.apache.ctakes.core.resource.StringIntegerMapResource
• org.apache.ctakes.core.resource.StringMapResource
• org.apache.ctakes.core.resource.StringsResource
• org.apache.ctakes.temporal.pipelines.TemporalExtractionPipeline_ImplBase.Options
• org.apache.ctakes.dictionary.lookup2.consumer.TermConsumer
• org.apache.ctakes.core.ci.TextModifier
• org.apache.ctakes.core.cc.pretty.textspan.TextSpan
• org.apache.ctakes.dictionary.lookup2.textspan.TextSpan
• org.apache.ctakes.coreference.util.ThreadDelegator
• org.apache.ctakes.temporal.utils.TimeRelationConstants
• org.apache.ctakes.dictionary.lookup2.consumer.UmlsConceptCreator
• org.apache.ctakes.ytex.umls.dao.UMLSDao
• org.apache.ctakes.ytex.weka.WekaAttributeEvaluator
• org.apache.ctakes.ytex.weka.WekaResultInstanceImporter
• org.apache.ctakes.ytex.weka.WekaResultsImporter
• org.apache.ctakes.dictionary.lookup2.ae.WindowProcessor
• org.apache.ctakes.ytex.kernel.wsd.WordSenseDisambiguator

Annotation Type Hierarchy

• org.apache.ctakes.core.pipeline.PipeBitInfo (implements java.lang.annotation.Annotation)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.apache.ctakes.assertion.attributes.features.selection.MutualInformationFeatureSelection.CombineScoreMethod (implements com.google.common.base.Function<F,T>)
    • org.apache.ctakes.assertion.cc.JudgeAttributeInstances.Selector
    • org.apache.ctakes.assertion.medfacts.cleartk.AssertionCleartkAnalysisEngine.FEATURE_CONFIG
    • org.apache.ctakes.assertion.pipelines.SharpCorpusSplit.Subcorpus
    • org.apache.ctakes.core.ae.SentenceDetectorAnnotatorBIO.FEAT_CONFIG
    • org.apache.ctakes.core.cc.JdbcWriterTemplate.I2b2FieldInfo (implements org.apache.ctakes.core.cc.AbstractJdbcWriter.FieldInfo)
    • org.apache.ctakes.core.cc.pretty.SemanticGroup
    • org.apache.ctakes.core.cleartk.ContinuousTextExtractor.OovStrategy
    • org.apache.ctakes.core.pipeline.CuiCollector
    • org.apache.ctakes.core.pipeline.EntityCollector
    • org.apache.ctakes.core.pipeline.PipeBitInfo.Role
    • org.apache.ctakes.core.pipeline.PipeBitInfo.TypeProduct
    • org.apache.ctakes.core.util.PropertyAeFactory
    • org.apache.ctakes.coreference.eval.EvaluationOfEventCoreference.EVAL_SYSTEM
    • org.apache.ctakes.coreference.eval.helpers.B3Type
    • org.apache.ctakes.coreference.eval.helpers.CEAFType
    • org.apache.ctakes.coreference.eval.helpers.KAlphaType
    • org.apache.ctakes.coreference.eval.helpers.MatType
    • org.apache.ctakes.coreference.eval.helpers.PairType
    • org.apache.ctakes.dictionary.lookup.vo.LookupTokenComparator (implements java.util.Comparator<T>)
    • org.apache.ctakes.dictionary.lookup2.util.CuiCodeUtil
    • org.apache.ctakes.dictionary.lookup2.util.JdbcConnectionFactory
    • org.apache.ctakes.dictionary.lookup2.util.UmlsUserApprover
    • org.apache.ctakes.gui.dictionary.umls.CuiCodeUtil
    • org.apache.ctakes.gui.dictionary.umls.MrconsoIndex
    • org.apache.ctakes.gui.dictionary.umls.MrstyIndex
    • org.apache.ctakes.gui.dictionary.umls.Tui
    • org.apache.ctakes.gui.dictionary.umls.VocabularyStore
    • org.apache.ctakes.gui.pipeline.bit.info.PipeBitInfoComparator (implements java.util.Comparator<T>)
    • org.apache.ctakes.gui.pipeline.bit.info.ProductIconFactory
    • org.apache.ctakes.gui.pipeline.bit.PipeBitFinder
    • org.apache.ctakes.gui.pipeline.bit.PipeBitPainter
    • org.apache.ctakes.relationextractor.eval.SHARPXMI.EvaluateOn
    • org.apache.ctakes.relationextractor.metastasis.AnatomicalSiteListExtractorPipeline.ListAndConjunctionAe.State
    • org.apache.ctakes.temporal.ae.feature.selection.MutualInformationFeatureSelection.CombineScoreMethod (implements com.google.common.base.Function<F,T>)
    • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.XMLFormat
    • org.apache.ctakes.temporal.eval.Evaluation_ImplBase.Subcorpus
    • org.apache.ctakes.temporal.nn.ae.EventTimeTokenBasedAnnotator.OutputMode
    • org.apache.ctakes.temporal.utils.TlinkType
    • org.apache.ctakes.ytex.kernel.ClassifierEvaluationParser.ParseOption
    • org.apache.ctakes.ytex.kernel.ImputedFeatureEvaluator.MeasureType
    • org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityService.SimilarityMetricEnum
    • org.apache.ctakes.ytex.kernel.SparseDataExporter.ScopeEnum
    • org.apache.ctakes.ytex.weka.GramMatrixExporterImpl.GramMatrixType