org.apache.ctakes.dictionary.lookup2.consumer

Interface TermConsumer

All Known Implementing Classes:

AbstractTermConsumer, DefaultTermConsumer, PrecisionTermConsumer, SemanticCleanupTermConsumer

public interface TermConsumer

Stores terms in the cas Author: SPF Affiliation: CHIP-NLP Date: 12/5/13

Method Summary

Modifier and Type	Method and Description
void	consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String codingScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)

Method Detail

consumeHits

void consumeHits(org.apache.uima.jcas.JCas jcas,
                 RareWordDictionary dictionary,
                 CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis,
                 CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
          throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Parameters:

jcas - -

dictionary - the dictionary: Anatomical Site, Disease/Disorder, Drug, combination, etc.

textSpanCuis - collection of discovered terms

cuiConcepts - map of cuis to concepts

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

consumeTypeIdHits

void consumeTypeIdHits(org.apache.uima.jcas.JCas jcas,
                       String codingScheme,
                       int cTakesSemantic,
                       CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis,
                       CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
                throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Parameters:

jcas - -

codingScheme - - name of the coding scheme to use if no secondary (snomed, rxnorm) schemes exist

cTakesSemantic - cTakes IdentifiedAnnotation only accepts an integer as a cTakesSemantic

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException