| org.apache.ctakes.assertion.attributes |
|
| org.apache.ctakes.assertion.attributes.features |
|
| org.apache.ctakes.assertion.attributes.features.selection |
|
| org.apache.ctakes.assertion.attributes.generic |
|
| org.apache.ctakes.assertion.attributes.history |
|
| org.apache.ctakes.assertion.attributes.subject |
|
| org.apache.ctakes.assertion.cc |
|
| org.apache.ctakes.assertion.cr |
|
| org.apache.ctakes.assertion.eval |
|
| org.apache.ctakes.assertion.medfacts |
|
| org.apache.ctakes.assertion.medfacts.cleartk |
|
| org.apache.ctakes.assertion.medfacts.cleartk.extractors |
|
| org.apache.ctakes.assertion.medfacts.i2b2.api |
|
| org.apache.ctakes.assertion.medfacts.types |
|
| org.apache.ctakes.assertion.pipelines |
|
| org.apache.ctakes.assertion.stub |
|
| org.apache.ctakes.assertion.train |
|
| org.apache.ctakes.assertion.util |
|
| org.apache.ctakes.assertion.zoner.types |
|
| org.apache.ctakes.chunker.ae |
|
| org.apache.ctakes.chunker.ae.adjuster |
|
| org.apache.ctakes.clinicalpipeline |
|
| org.apache.ctakes.clinicalpipeline.ae |
|
| org.apache.ctakes.clinicalpipeline.runtime |
|
| org.apache.ctakes.constituency.parser |
|
| org.apache.ctakes.constituency.parser.ae |
|
| org.apache.ctakes.constituency.parser.treekernel |
|
| org.apache.ctakes.constituency.parser.uima.co |
|
| org.apache.ctakes.constituency.parser.uima.type |
|
| org.apache.ctakes.constituency.parser.util |
|
| org.apache.ctakes.contexttokenizer.ae |
|
| org.apache.ctakes.core.ae |
|
| org.apache.ctakes.core.cc |
|
| org.apache.ctakes.core.cc.pretty |
|
| org.apache.ctakes.core.cc.pretty.cell |
|
| org.apache.ctakes.core.cc.pretty.html |
|
| org.apache.ctakes.core.cc.pretty.plaintext |
|
| org.apache.ctakes.core.cc.pretty.row |
|
| org.apache.ctakes.core.cc.pretty.textspan |
|
| org.apache.ctakes.core.cc.property.plaintext |
|
| org.apache.ctakes.core.ci |
|
| org.apache.ctakes.core.cleartk |
|
| org.apache.ctakes.core.config |
|
| org.apache.ctakes.core.cpe |
|
| org.apache.ctakes.core.cr |
|
| org.apache.ctakes.core.fsm.adapters |
This package contains adapters for JCas token objects comforming to the input interfaces used by the FSM project.
|
| org.apache.ctakes.core.fsm.condition |
|
| org.apache.ctakes.core.fsm.machine |
|
| org.apache.ctakes.core.fsm.output |
|
| org.apache.ctakes.core.fsm.state |
|
| org.apache.ctakes.core.fsm.token |
|
| org.apache.ctakes.core.fsm.token.adapter |
|
| org.apache.ctakes.core.knowtator |
|
| org.apache.ctakes.core.nlp.tokenizer |
|
| org.apache.ctakes.core.pipeline |
|
| org.apache.ctakes.core.resource |
|
| org.apache.ctakes.core.sentence |
|
| org.apache.ctakes.core.util |
|
| org.apache.ctakes.core.util.collection |
|
| org.apache.ctakes.core.util.regex |
|
| org.apache.ctakes.coreference.ae |
|
| org.apache.ctakes.coreference.ae.features |
|
| org.apache.ctakes.coreference.ae.features.cluster |
|
| org.apache.ctakes.coreference.ae.features.salience |
|
| org.apache.ctakes.coreference.ae.pairing |
|
| org.apache.ctakes.coreference.ae.pairing.cluster |
|
| org.apache.ctakes.coreference.cc |
|
| org.apache.ctakes.coreference.eval |
|
| org.apache.ctakes.coreference.eval.helpers |
|
| org.apache.ctakes.coreference.extractors |
|
| org.apache.ctakes.coreference.factory |
|
| org.apache.ctakes.coreference.treekernel.training |
|
| org.apache.ctakes.coreference.type |
|
| org.apache.ctakes.coreference.util |
|
| org.apache.ctakes.dependency.parser |
|
| org.apache.ctakes.dependency.parser.ae |
|
| org.apache.ctakes.dependency.parser.ae.util |
|
| org.apache.ctakes.dependency.parser.cr |
|
| org.apache.ctakes.dependency.parser.util |
|
| org.apache.ctakes.dictionary.assertion |
|
| org.apache.ctakes.dictionary.lookup |
|
| org.apache.ctakes.dictionary.lookup.ae |
|
| org.apache.ctakes.dictionary.lookup.algorithms |
|
| org.apache.ctakes.dictionary.lookup.filter |
|
| org.apache.ctakes.dictionary.lookup.jdbc |
|
| org.apache.ctakes.dictionary.lookup.lucene |
|
| org.apache.ctakes.dictionary.lookup.phrasebuilder |
|
| org.apache.ctakes.dictionary.lookup.strtable |
|
| org.apache.ctakes.dictionary.lookup.vo |
|
| org.apache.ctakes.dictionary.lookup2.ae |
|
| org.apache.ctakes.dictionary.lookup2.concept |
|
| org.apache.ctakes.dictionary.lookup2.consumer |
|
| org.apache.ctakes.dictionary.lookup2.dictionary |
|
| org.apache.ctakes.dictionary.lookup2.term |
|
| org.apache.ctakes.dictionary.lookup2.textspan |
|
| org.apache.ctakes.dictionary.lookup2.util |
|
| org.apache.ctakes.drugner |
|
| org.apache.ctakes.drugner.ae |
|
| org.apache.ctakes.drugner.ae.impl |
|
| org.apache.ctakes.drugner.cc |
|
| org.apache.ctakes.drugner.elements |
|
| org.apache.ctakes.drugner.fsm.elements.conditions |
|
| org.apache.ctakes.drugner.fsm.machines.elements |
|
| org.apache.ctakes.drugner.fsm.machines.util |
|
| org.apache.ctakes.drugner.fsm.output.elements |
|
| org.apache.ctakes.drugner.fsm.output.util |
|
| org.apache.ctakes.drugner.fsm.states.util |
|
| org.apache.ctakes.drugner.type |
|
| org.apache.ctakes.examples.ae |
|
| org.apache.ctakes.examples.pipeline |
|
| org.apache.ctakes.gui.action |
|
| org.apache.ctakes.gui.component |
|
| org.apache.ctakes.gui.dictionary |
|
| org.apache.ctakes.gui.dictionary.umls |
|
| org.apache.ctakes.gui.dictionary.util |
|
| org.apache.ctakes.gui.pipeline |
|
| org.apache.ctakes.gui.pipeline.bit |
|
| org.apache.ctakes.gui.pipeline.bit.available |
|
| org.apache.ctakes.gui.pipeline.bit.info |
|
| org.apache.ctakes.gui.pipeline.bit.parameter |
|
| org.apache.ctakes.gui.pipeline.bit.user |
|
| org.apache.ctakes.gui.pipeline.piper |
|
| org.apache.ctakes.gui.util |
|
| org.apache.ctakes.jdl |
Copied from https://code.google.com/p/jdl-prj/
Following modifications:
fixed batch insert
support specification of tab as delimiter
disable text encapsulators by defalt in CsvLoader
change package names
|
| org.apache.ctakes.jdl.common |
Common utility.
|
| org.apache.ctakes.jdl.data.base |
Database.
|
| org.apache.ctakes.jdl.data.loader |
Loader of data.
|
| org.apache.ctakes.jdl.data.xml |
XML data.
|
| org.apache.ctakes.jdl.data.xml.jaxb |
JAXB utility.
|
| org.apache.ctakes.jdl.schema.xdl |
|
| org.apache.ctakes.lvg.ae |
|
| org.apache.ctakes.lvg.resource |
|
| org.apache.ctakes.necontexts |
|
| org.apache.ctakes.necontexts.negation |
|
| org.apache.ctakes.necontexts.status |
|
| org.apache.ctakes.postagger |
|
| org.apache.ctakes.preprocessor |
|
| org.apache.ctakes.preprocessor.ae |
|
| org.apache.ctakes.preprocessor.test |
|
| org.apache.ctakes.relationextractor.ae |
|
| org.apache.ctakes.relationextractor.ae.baselines |
|
| org.apache.ctakes.relationextractor.ae.features |
|
| org.apache.ctakes.relationextractor.data |
|
| org.apache.ctakes.relationextractor.data.analysis |
|
| org.apache.ctakes.relationextractor.eval |
|
| org.apache.ctakes.relationextractor.knowtator |
|
| org.apache.ctakes.relationextractor.metastasis |
|
| org.apache.ctakes.relationextractor.pipelines |
|
| org.apache.ctakes.sideeffect.ae |
|
| org.apache.ctakes.sideeffect.cc |
|
| org.apache.ctakes.sideeffect.type |
|
| org.apache.ctakes.sideeffect.util |
|
| org.apache.ctakes.smokingstatus |
|
| org.apache.ctakes.smokingstatus.ae |
|
| org.apache.ctakes.smokingstatus.cc |
|
| org.apache.ctakes.smokingstatus.context |
|
| org.apache.ctakes.smokingstatus.context.negation |
|
| org.apache.ctakes.smokingstatus.i2b2.type |
|
| org.apache.ctakes.smokingstatus.lookup.ae |
|
| org.apache.ctakes.smokingstatus.machine |
|
| org.apache.ctakes.smokingstatus.MLutil |
|
| org.apache.ctakes.smokingstatus.patientLevel |
|
| org.apache.ctakes.smokingstatus.type |
|
| org.apache.ctakes.smokingstatus.type.libsvm |
|
| org.apache.ctakes.smokingstatus.util |
|
| org.apache.ctakes.template.filler.ae |
|
| org.apache.ctakes.temporal.ae |
|
| org.apache.ctakes.temporal.ae.baselines |
|
| org.apache.ctakes.temporal.ae.feature |
|
| org.apache.ctakes.temporal.ae.feature.duration |
|
| org.apache.ctakes.temporal.ae.feature.selection |
|
| org.apache.ctakes.temporal.ae.feature.treekernel |
|
| org.apache.ctakes.temporal.data.analysis |
|
| org.apache.ctakes.temporal.duration |
|
| org.apache.ctakes.temporal.eval |
|
| org.apache.ctakes.temporal.keras |
|
| org.apache.ctakes.temporal.nn.ae |
|
| org.apache.ctakes.temporal.nn.data |
|
| org.apache.ctakes.temporal.nn.eval |
|
| org.apache.ctakes.temporal.pipelines |
|
| org.apache.ctakes.temporal.utils |
|
| org.apache.ctakes.typesystem.type.constants |
|
| org.apache.ctakes.typesystem.type.refsem |
|
| org.apache.ctakes.typesystem.type.relation |
|
| org.apache.ctakes.typesystem.type.structured |
|
| org.apache.ctakes.typesystem.type.syntax |
|
| org.apache.ctakes.typesystem.type.temporary.assertion |
|
| org.apache.ctakes.typesystem.type.textsem |
|
| org.apache.ctakes.typesystem.type.textspan |
|
| org.apache.ctakes.typesystem.type.util |
|
| org.apache.ctakes.utils.distsem |
|
| org.apache.ctakes.utils.env |
|
| org.apache.ctakes.utils.kernel |
|
| org.apache.ctakes.utils.struct |
|
| org.apache.ctakes.utils.test |
|
| org.apache.ctakes.utils.tree |
|
| org.apache.ctakes.utils.wiki |
|
| org.apache.ctakes.utils.xcas_comparison |
|
| org.apache.ctakes.ytex |
|
| org.apache.ctakes.ytex.dao |
|
| org.apache.ctakes.ytex.kernel |
|
| org.apache.ctakes.ytex.kernel.dao |
|
| org.apache.ctakes.ytex.kernel.evaluator |
|
| org.apache.ctakes.ytex.kernel.metric |
|
| org.apache.ctakes.ytex.kernel.model |
|
| org.apache.ctakes.ytex.kernel.pagerank |
|
| org.apache.ctakes.ytex.kernel.tree |
|
| org.apache.ctakes.ytex.kernel.wsd |
|
| org.apache.ctakes.ytex.libsvm |
|
| org.apache.ctakes.ytex.R |
|
| org.apache.ctakes.ytex.semil |
|
| org.apache.ctakes.ytex.sparsematrix |
|
| org.apache.ctakes.ytex.svmlight |
|
| org.apache.ctakes.ytex.tools |
|
| org.apache.ctakes.ytex.tools.docanalyzer |
|
| org.apache.ctakes.ytex.uima |
|
| org.apache.ctakes.ytex.uima.annotators |
|
| org.apache.ctakes.ytex.uima.dao |
|
| org.apache.ctakes.ytex.uima.lookup.ae |
|
| org.apache.ctakes.ytex.uima.mapper |
|
| org.apache.ctakes.ytex.uima.model |
|
| org.apache.ctakes.ytex.uima.resource |
|
| org.apache.ctakes.ytex.uima.types |
|
| org.apache.ctakes.ytex.umls.dao |
|
| org.apache.ctakes.ytex.umls.model |
|
| org.apache.ctakes.ytex.web.search |
|
| org.apache.ctakes.ytex.weka |
|
| org.apache.ctakes.ytex.ws |
|
| org.mitre.medfacts.uima |
|