Package org.apache.ctakes.ytex.kernel

Interface Summary

Interface	Description
BagOfWordsDecorator	Classes that delegate to the BagOfWordsExporter can pass this decorator in to add additional attributes
BagOfWordsExporter
ClassifierEvaluationParser
CytoscapeHelper
FoldGenerator
ImputedFeatureEvaluator
InfoContentEvaluator
IntrinsicInfoContentEvaluator
KernelUtil
SparseDataExporter
SparseDataFormatter	stateful class called by the sparseDataExporter to export sparse data in a specific format.
SparseDataFormatterFactory

Class Summary

Class	Description
AbstractBagOfWordsExporter
BagOfWordsData	Data structure populated by AbstractBagOfWordsExporter that has all the instance attributes needed for exporting to various formats.
BaseClassifierEvaluationParser	miscellaneous methods used for parsing various output types
BaseClassifierEvaluationParser.InstanceClassInfo
BaseSparseDataFormatter
ClassifierEvaluationImporter	parse classifier evaluation results.
ClassifierEvaluationResult
ClassifierEvaluationResults
ClassifierEvalUtil
CytoscapeHelperImpl
FileUtil	miscellaneous utility functions used for data import/export
FileUtil.DirectoryFileFilter	file filter to get directories
FileUtil.PrefixFileFilter	get files that start with specified prefix.
FileUtil.SuffixFileFilter	filter files by suffix
FoldGeneratorImpl	utility generates cv fold splits, stores in db.
ImputedFeatureEvaluatorImpl	Calculate the mutual information of each concept of a corpus wrt a concept graph and classification task (label) and possibly a fold.
ImputedFeatureEvaluatorImpl.JointDistribution	joint distribution of concept (x) and class (y).
ImputedFeatureEvaluatorImpl.Parameters	We are passing around quite a few parameters.
InfoContentEvaluatorImpl	Calculate the information content of each concept in a corpus wrt the specified concept graph.
InstanceData	data structure to store instance ids, their classes, folds, runs, and labels.
IntrinsicInfoContentEvaluatorImpl
IntrinsicInfoContentEvaluatorImpl.IntrinsicICInfo
IRMetrics
KernelContextHolder
KernelUtilImpl
OrderedPair<T extends Comparable<T>>	simple pair class used for cache keys where the result is symmetric, e.g.
Pair<T>	simple object pair implementation
RRFtoWideTab	Convert RRF files to UCS2 tab-delimited format for import into SQL Server.
SimSvcContextHolder
SparseData	Data structure populated by SparseDataExporter that has all the instance attributes needed for exporting to various formats.
SparseDataExporterImpl
SvmlinEvaluationParser
SVMLinFormatterFactory	for each train/test pair create the following files: [prefix]class.txt - as in semil: instance id \t train/test flag \t target class id
SVMLinFormatterFactory.SVMLinDataFormatter

Enum Summary

Enum	Description
ClassifierEvaluationParser.ParseOption	Property keys for various parse options
ImputedFeatureEvaluator.MeasureType
SparseDataExporter.ScopeEnum