org.apache.ctakes.dictionary.lookup2.consumer

Class AbstractTermConsumer

java.lang.Object

org.apache.ctakes.dictionary.lookup2.consumer.AbstractTermConsumer

All Implemented Interfaces:

TermConsumer

Direct Known Subclasses:

DefaultTermConsumer, PrecisionTermConsumer, SemanticCleanupTermConsumer

public abstract class AbstractTermConsumer
extends Object
implements TermConsumer

Author: SPF Affiliation: CHIP-NLP Date: 2/5/14

Constructor Summary

Constructors

Constructor and Description
AbstractTermConsumer(org.apache.uima.UimaContext uimaContext, Properties properties)

Method Summary

Modifier and Type	Method and Description
void	consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
protected String	getCodingScheme()
protected static Collection<Integer>	getUsedcTakesSemantics(CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
protected static boolean	hascTakesSemantic(Integer cTakesSemantic, Iterable<Concept> concepts)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.apache.ctakes.dictionary.lookup2.consumer.TermConsumer

consumeTypeIdHits

Constructor Detail

AbstractTermConsumer

public AbstractTermConsumer(org.apache.uima.UimaContext uimaContext,
                            Properties properties)

Method Detail

consumeHits

public void consumeHits(org.apache.uima.jcas.JCas jcas,
                        RareWordDictionary dictionary,
                        CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis,
                        CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
                 throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

consumeHits in interface TermConsumer

Parameters:

jcas - -

dictionary - the dictionary: Anatomical Site, Disease/Disorder, Drug, combination, etc.

textSpanCuis - collection of discovered terms

cuiConcepts - map of cuis to concepts

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

getCodingScheme

protected String getCodingScheme()

getUsedcTakesSemantics

protected static Collection<Integer> getUsedcTakesSemantics(CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)

hascTakesSemantic

protected static boolean hascTakesSemantic(Integer cTakesSemantic,
                                           Iterable<Concept> concepts)