org.apache.ctakes.temporal.ae

Class I2B2TemporalXMLReader

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

org.apache.uima.fit.component.JCasAnnotator_ImplBase

org.apache.ctakes.temporal.ae.I2B2TemporalXMLReader

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

@PipeBitInfo(name="I2B2 XML Reader (THYME)",
             description="Reads annotations from THYME schema I2B2 XML files in a directory.",
             role=SPECIAL,
             products={EVENT,TEMPORAL_RELATION})
public class I2B2TemporalXMLReader
extends org.apache.uima.fit.component.JCasAnnotator_ImplBase

Field Summary

Fields

Modifier and Type	Field and Description
protected File	inputDir
protected boolean	mapThyme
static String	PARAM_INPUT_DIR
static String	PARAM_MAP_THYME

Constructor Summary

Constructors

Constructor and Description
I2B2TemporalXMLReader()

Method Summary

Modifier and Type	Method and Description
static org.apache.uima.analysis_engine.AnalysisEngineDescription	getDescription(File xmlDirectory)
void	process(org.apache.uima.jcas.JCas jcas)

Methods inherited from class org.apache.uima.fit.component.JCasAnnotator_ImplBase

getLogger, initialize

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PARAM_INPUT_DIR

public static final String PARAM_INPUT_DIR

See Also:

Constant Field Values

inputDir

protected File inputDir

PARAM_MAP_THYME

public static final String PARAM_MAP_THYME

See Also:

Constant Field Values

mapThyme

protected boolean mapThyme

Constructor Detail

I2B2TemporalXMLReader

public I2B2TemporalXMLReader()

Method Detail

process

public void process(org.apache.uima.jcas.JCas jcas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

getDescription

public static org.apache.uima.analysis_engine.AnalysisEngineDescription getDescription(File xmlDirectory)
                                                                                throws org.apache.uima.resource.ResourceInitializationException

Throws:

org.apache.uima.resource.ResourceInitializationException