org.apache.ctakes.temporal.nn.ae

Class EventEventTokenBasedAnnotator

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

org.apache.uima.fit.component.JCasAnnotator_ImplBase

org.cleartk.ml.CleartkAnnotator<String>

org.apache.ctakes.temporal.nn.ae.EventEventTokenBasedAnnotator

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent, org.apache.uima.fit.factory.initializable.Initializable

@PipeBitInfo(name="E-E Token TLinker",
             description="Creates Event - Event TLinks from Token type.",
             dependencies={SECTION,SENTENCE,EVENT},
             products=TEMPORAL_RELATION)
public class EventEventTokenBasedAnnotator
extends org.cleartk.ml.CleartkAnnotator<String>

Field Summary

Fields

Modifier and Type	Field and Description
static String	NO_RELATION_CATEGORY
static Map<String,Integer>	timex_idx
static EventTimeTokenBasedAnnotator.OutputMode	timexMode

Fields inherited from class org.cleartk.ml.CleartkAnnotator

classifier, dataWriter, PARAM_CLASSIFIER_FACTORY_CLASS_NAME, PARAM_DATA_WRITER_FACTORY_CLASS_NAME, PARAM_IS_TRAINING

Constructor Summary

Constructors

Constructor and Description
EventEventTokenBasedAnnotator()

Method Summary

Modifier and Type	Method and Description
protected void	createRelation(org.apache.uima.jcas.JCas jCas, IdentifiedAnnotation arg1, IdentifiedAnnotation arg2, String predictedCategory, double confidence)
protected String	getRelationCategory(Map<List<org.apache.uima.jcas.tcas.Annotation>,BinaryTextRelation> relationLookup, IdentifiedAnnotation arg1, IdentifiedAnnotation arg2) original way of getting label
protected String	getRelationCategory2(Map<List<org.apache.uima.jcas.tcas.Annotation>,BinaryTextRelation> relationLookup, IdentifiedAnnotation arg1, IdentifiedAnnotation arg2)
static String	getTokenTimexContext(org.apache.uima.jcas.JCas jCas, Sentence sentence, IdentifiedAnnotation arg1, String leftType, IdentifiedAnnotation arg2, String rightType, int contextSize)
void	process(org.apache.uima.jcas.JCas jCas)
Map<String,Integer>	TimexIdxReader(InputStream in)
static void	TimexIdxWriter()

Methods inherited from class org.cleartk.ml.CleartkAnnotator

collectionProcessComplete, initialize, isTraining

Methods inherited from class org.apache.uima.fit.component.JCasAnnotator_ImplBase

getLogger

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

NO_RELATION_CATEGORY

public static final String NO_RELATION_CATEGORY

See Also:

Constant Field Values

timex_idx

public static Map<String,Integer> timex_idx

timexMode

public static EventTimeTokenBasedAnnotator.OutputMode timexMode

Constructor Detail

EventEventTokenBasedAnnotator

public EventEventTokenBasedAnnotator()

Method Detail

TimexIdxReader

public Map<String,Integer> TimexIdxReader(InputStream in)
                                   throws IOException

Throws:

IOException

TimexIdxWriter

public static void TimexIdxWriter()
                           throws IOException

Throws:

IOException

process

public void process(org.apache.uima.jcas.JCas jCas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

getTokenTimexContext

public static String getTokenTimexContext(org.apache.uima.jcas.JCas jCas,
                                          Sentence sentence,
                                          IdentifiedAnnotation arg1,
                                          String leftType,
                                          IdentifiedAnnotation arg2,
                                          String rightType,
                                          int contextSize)

getRelationCategory

protected String getRelationCategory(Map<List<org.apache.uima.jcas.tcas.Annotation>,BinaryTextRelation> relationLookup,
                                     IdentifiedAnnotation arg1,
                                     IdentifiedAnnotation arg2)

original way of getting label

Parameters:

relationLookup -

arg1 -

arg2 -

Returns:

getRelationCategory2

protected String getRelationCategory2(Map<List<org.apache.uima.jcas.tcas.Annotation>,BinaryTextRelation> relationLookup,
                                      IdentifiedAnnotation arg1,
                                      IdentifiedAnnotation arg2)

createRelation

protected void createRelation(org.apache.uima.jcas.JCas jCas,
                              IdentifiedAnnotation arg1,
                              IdentifiedAnnotation arg2,
                              String predictedCategory,
                              double confidence)