org.apache.ctakes.ytex.kernel.dao

Class ClassifierEvaluationDaoImpl

java.lang.Object

org.apache.ctakes.ytex.kernel.dao.ClassifierEvaluationDaoImpl

All Implemented Interfaces:

ClassifierEvaluationDao

public class ClassifierEvaluationDaoImpl
extends Object
implements ClassifierEvaluationDao

Constructor Summary

Constructors

Constructor and Description
ClassifierEvaluationDaoImpl()

Method Summary

Modifier and Type	Method and Description
void	deleteCrossValidationFoldByName(String corpusName, String splitName)
void	deleteFeatureEvaluation(String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, Double param1, String param2)
void	deleteFeatureEvaluationByNameAndType(String corpusName, String featureSetName, String type)
List<Object[]>	getCorpusCuiTuis(String corpusName, String conceptGraphName, String conceptSetName)
CrossValidationFold	getCrossValidationFold(String corpusName, String splitName, String label, int run, int fold)
Map<String,Double>	getFeatureRankEvaluations(Set<String> featureNames, String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2)
Map<String,Double>	getFeatureRankEvaluations(String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2)
Map<String,FeatureRank>	getFeatureRanks(Set<String> featureNames, String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2)
List<FeatureRank>	getImputedFeaturesByPropagatedCutoff(String corpusName, String conceptSetName, String label, String evaluationType, String conceptGraphName, String propEvaluationType, int propRankCutoff)
Map<String,Double>	getInfoContent(String corpusName, String conceptGraphName, String conceptSet)
List<ConceptInfo>	getIntrinsicInfoContent(String conceptGraphName)
Integer	getMaxDepth(String conceptGraphName)
Double	getMaxFeatureEvaluation(String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2)
org.hibernate.SessionFactory	getSessionFactory()
List<FeatureRank>	getThresholdFeatures(String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2, double evaluationThreshold)
List<FeatureRank>	getTopFeatures(String corpusName, String featureSetName, String label, String evaluationType, Integer foldId, double param1, String param2, Integer parentConceptTopThreshold)
void	saveClassifierEvaluation(ClassifierEvaluation eval, Map<Integer,String> irClassMap, boolean saveInstanceEval)
void	saveClassifierEvaluation(ClassifierEvaluation eval, Map<Integer,String> irClassMap, boolean saveInstanceEval, boolean saveIRStats, Integer excludeTargetClassId)
void	saveFeatureEvaluation(FeatureEvaluation featureEvaluation, List<FeatureRank> features)
void	saveFeatureParentChild(FeatureParentChild parchd)
void	saveFold(CrossValidationFold fold)
void	setSessionFactory(org.hibernate.SessionFactory sessionFactory)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ClassifierEvaluationDaoImpl

public ClassifierEvaluationDaoImpl()

Method Detail

getSessionFactory

public org.hibernate.SessionFactory getSessionFactory()

setSessionFactory

public void setSessionFactory(org.hibernate.SessionFactory sessionFactory)

deleteCrossValidationFoldByName

public void deleteCrossValidationFoldByName(String corpusName,
                                            String splitName)

Specified by:

deleteCrossValidationFoldByName in interface ClassifierEvaluationDao

getCrossValidationFold

public CrossValidationFold getCrossValidationFold(String corpusName,
                                                  String splitName,
                                                  String label,
                                                  int run,
                                                  int fold)

Specified by:

getCrossValidationFold in interface ClassifierEvaluationDao

saveClassifierEvaluation

public void saveClassifierEvaluation(ClassifierEvaluation eval,
                                     Map<Integer,String> irClassMap,
                                     boolean saveInstanceEval)

Specified by:

saveClassifierEvaluation in interface ClassifierEvaluationDao

saveClassifierEvaluation

public void saveClassifierEvaluation(ClassifierEvaluation eval,
                                     Map<Integer,String> irClassMap,
                                     boolean saveInstanceEval,
                                     boolean saveIRStats,
                                     Integer excludeTargetClassId)

Specified by:

saveClassifierEvaluation in interface ClassifierEvaluationDao

Parameters:

eval - evaluation to save

saveInstanceEval - save instance level evaluations - default false

saveIRStats - save IR statistics - default true

excludeTargetClassId - for semi-supervised learners, don't want to include the unlabeled instances in computation of ir statistics. this specifies the class id of the unlabeled instances (default 0)

saveFold

public void saveFold(CrossValidationFold fold)

Specified by:

saveFold in interface ClassifierEvaluationDao

saveFeatureEvaluation

public void saveFeatureEvaluation(FeatureEvaluation featureEvaluation,
                                  List<FeatureRank> features)

Specified by:

saveFeatureEvaluation in interface ClassifierEvaluationDao

deleteFeatureEvaluationByNameAndType

public void deleteFeatureEvaluationByNameAndType(String corpusName,
                                                 String featureSetName,
                                                 String type)

Specified by:

deleteFeatureEvaluationByNameAndType in interface ClassifierEvaluationDao

getTopFeatures

public List<FeatureRank> getTopFeatures(String corpusName,
                                        String featureSetName,
                                        String label,
                                        String evaluationType,
                                        Integer foldId,
                                        double param1,
                                        String param2,
                                        Integer parentConceptTopThreshold)

Specified by:

getTopFeatures in interface ClassifierEvaluationDao

getMaxFeatureEvaluation

public Double getMaxFeatureEvaluation(String corpusName,
                                      String featureSetName,
                                      String label,
                                      String evaluationType,
                                      Integer foldId,
                                      double param1,
                                      String param2)

Specified by:

getMaxFeatureEvaluation in interface ClassifierEvaluationDao

getThresholdFeatures

public List<FeatureRank> getThresholdFeatures(String corpusName,
                                              String featureSetName,
                                              String label,
                                              String evaluationType,
                                              Integer foldId,
                                              double param1,
                                              String param2,
                                              double evaluationThreshold)

Specified by:

getThresholdFeatures in interface ClassifierEvaluationDao

deleteFeatureEvaluation

public void deleteFeatureEvaluation(String corpusName,
                                    String featureSetName,
                                    String label,
                                    String evaluationType,
                                    Integer foldId,
                                    Double param1,
                                    String param2)

Specified by:

deleteFeatureEvaluation in interface ClassifierEvaluationDao

getFeatureRanks

public Map<String,FeatureRank> getFeatureRanks(Set<String> featureNames,
                                               String corpusName,
                                               String featureSetName,
                                               String label,
                                               String evaluationType,
                                               Integer foldId,
                                               double param1,
                                               String param2)

Specified by:

getFeatureRanks in interface ClassifierEvaluationDao

getFeatureRankEvaluations

public Map<String,Double> getFeatureRankEvaluations(Set<String> featureNames,
                                                    String corpusName,
                                                    String featureSetName,
                                                    String label,
                                                    String evaluationType,
                                                    Integer foldId,
                                                    double param1,
                                                    String param2)

Specified by:

getFeatureRankEvaluations in interface ClassifierEvaluationDao

getFeatureRankEvaluations

public Map<String,Double> getFeatureRankEvaluations(String corpusName,
                                                    String featureSetName,
                                                    String label,
                                                    String evaluationType,
                                                    Integer foldId,
                                                    double param1,
                                                    String param2)

Specified by:

getFeatureRankEvaluations in interface ClassifierEvaluationDao

getCorpusCuiTuis

public List<Object[]> getCorpusCuiTuis(String corpusName,
                                       String conceptGraphName,
                                       String conceptSetName)

Specified by:

getCorpusCuiTuis in interface ClassifierEvaluationDao

getInfoContent

public Map<String,Double> getInfoContent(String corpusName,
                                         String conceptGraphName,
                                         String conceptSet)

Specified by:

getInfoContent in interface ClassifierEvaluationDao

getIntrinsicInfoContent

public List<ConceptInfo> getIntrinsicInfoContent(String conceptGraphName)

Specified by:

getIntrinsicInfoContent in interface ClassifierEvaluationDao

getMaxDepth

public Integer getMaxDepth(String conceptGraphName)

Specified by:

getMaxDepth in interface ClassifierEvaluationDao

saveFeatureParentChild

public void saveFeatureParentChild(FeatureParentChild parchd)

Specified by:

saveFeatureParentChild in interface ClassifierEvaluationDao

getImputedFeaturesByPropagatedCutoff

public List<FeatureRank> getImputedFeaturesByPropagatedCutoff(String corpusName,
                                                              String conceptSetName,
                                                              String label,
                                                              String evaluationType,
                                                              String conceptGraphName,
                                                              String propEvaluationType,
                                                              int propRankCutoff)

Specified by:

getImputedFeaturesByPropagatedCutoff in interface ClassifierEvaluationDao