org.apache.ctakes.drugner.ae

Class CopyDrugAnnotator

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

org.apache.ctakes.drugner.ae.CopyDrugAnnotator

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

@PipeBitInfo(name="Drug Copier",
             description="Copies data from an existing JCas into a new JCas.",
             role=SPECIAL,
             dependencies=SECTION)
public class CopyDrugAnnotator
extends org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Utility annotator that copy's data from an existing JCas object into a new JCas object.

Author:

duffp

Field Summary

Fields

Modifier and Type	Field and Description
static String	PARAM_SEGMENTS_TO_SKIP Value is "sectionOverrideSet".

Constructor Summary

Constructors

Constructor and Description
CopyDrugAnnotator()

Method Summary

Modifier and Type	Method and Description
void	initialize(org.apache.uima.UimaContext annotCtx)
void	process(org.apache.uima.jcas.JCas jcas)

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PARAM_SEGMENTS_TO_SKIP

public static final String PARAM_SEGMENTS_TO_SKIP

Value is "sectionOverrideSet". This parameter specifies which segments to skip. The resulting range of tokens will include the entire contents of the span within the section(s) specified in the sectionOverrideSet parameters of the SegmentLookupWindow annotator. The parameter should be of type String, should be multi-valued and optional.

See Also:

Constant Field Values

Constructor Detail

CopyDrugAnnotator

public CopyDrugAnnotator()

Method Detail

initialize

public void initialize(org.apache.uima.UimaContext annotCtx)
                throws org.apache.uima.resource.ResourceInitializationException

Specified by:

initialize in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

initialize in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

Throws:

org.apache.uima.resource.ResourceInitializationException

process

public void process(org.apache.uima.jcas.JCas jcas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException