public class EvaluationOfI2B2TemporalRelations extends EvaluationOfTemporalRelations_ImplBase
Modifier and Type | Class and Description |
---|---|
static class |
EvaluationOfI2B2TemporalRelations.AddClosure |
static class |
EvaluationOfI2B2TemporalRelations.AddFlippedOverlap |
static class |
EvaluationOfI2B2TemporalRelations.FindLongDisRelations |
static class |
EvaluationOfI2B2TemporalRelations.RemoveNonTLINKRelations |
static class |
EvaluationOfI2B2TemporalRelations.RemoveNullArgumentRelations
public static class RemoveEventEventRelations extends JCasAnnotator_ImplBase {
public static final String PARAM_RELATION_VIEW = "RelationView";
|
static class |
EvaluationOfI2B2TemporalRelations.RemoveRelations
public static class RemoveCrossSentenceRelations extends JCasAnnotator_ImplBase {
public static final String PARAM_SENTENCE_VIEW = "SentenceView";
|
EvaluationOfTemporalRelations_ImplBase.PreserveEventEventRelations, EvaluationOfTemporalRelations_ImplBase.RemoveGoldAttributes, EvaluationOfTemporalRelations_ImplBase.RemoveNonContainsRelations
Evaluation_ImplBase.CopyFromGold, Evaluation_ImplBase.CopyFromSystem, Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations, Evaluation_ImplBase.EntityMentionRemover, Evaluation_ImplBase.EventMentionRemover, Evaluation_ImplBase.Options, Evaluation_ImplBase.PittHeaderAnnotator, Evaluation_ImplBase.RemoveEnclosedLookupWindows, Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator, Evaluation_ImplBase.Subcorpus, Evaluation_ImplBase.TimexAnnotationCorrector, Evaluation_ImplBase.UriToDocumentTextAnnotatorCtakes, Evaluation_ImplBase.WriteAnaforaXML, Evaluation_ImplBase.WriteI2B2XML, Evaluation_ImplBase.XMIReader, Evaluation_ImplBase.XMIWriter, Evaluation_ImplBase.XMLFormat
Modifier and Type | Field and Description |
---|---|
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allBagsParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
flatParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
ftParams |
protected boolean |
skipTrain |
protected boolean |
useClosure |
protected boolean |
useGoldAttributes |
DEFAULT_BOTH_DIRECTIONS, DEFAULT_DOWNSAMPLE, DEFAULT_LAMBDA, DEFAULT_SVM_C, DEFAULT_SVM_G, DEFAULT_TK, defaultParams, params, printRelations
anaforaOutput, badNotes, GOLD_VIEW_NAME, i2b2Output, kernelParams, printErrors, printOverlapping, PROB_VIEW_NAME, rawTextDirectory, subcorpus, treebankDirectory, xmiDirectory, xmlDirectory, xmlFormat
Constructor and Description |
---|
EvaluationOfI2B2TemporalRelations(File baseDirectory,
File rawTextDirectory,
File xmlDirectory,
Evaluation_ImplBase.XMLFormat xmlFormat,
Evaluation_ImplBase.Subcorpus subcorpus,
File xmiDirectory,
File treebankDirectory,
boolean useClosure,
boolean printErrors,
boolean printRelations,
boolean baseline,
boolean useGoldAttributes,
String kernelParams,
EvaluationOfEventTimeRelations.ParameterSettings params) |
Modifier and Type | Method and Description |
---|---|
static void |
main(String[] args) |
protected org.cleartk.eval.AnnotationStatistics<String> |
test(org.apache.uima.collection.CollectionReader collectionReader,
File directory) |
protected void |
train(org.apache.uima.collection.CollectionReader collectionReader,
File directory) |
correctArgOrder, formatRelation, printRelationAnnotations
getCollectionReader, getPreprocessorAggregateBuilder, getRelationId, getTestItems, getTrainItems, getXMIReadingPreprocessorAggregateBuilder, getXMIWritingPreprocessorAggregateBuilder, prepareXMIsFor, selectExact, setI2B2Output
protected static EvaluationOfEventTimeRelations.ParameterSettings flatParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allBagsParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allParams
protected static EvaluationOfEventTimeRelations.ParameterSettings ftParams
protected boolean useClosure
protected boolean useGoldAttributes
protected boolean skipTrain
public EvaluationOfI2B2TemporalRelations(File baseDirectory, File rawTextDirectory, File xmlDirectory, Evaluation_ImplBase.XMLFormat xmlFormat, Evaluation_ImplBase.Subcorpus subcorpus, File xmiDirectory, File treebankDirectory, boolean useClosure, boolean printErrors, boolean printRelations, boolean baseline, boolean useGoldAttributes, String kernelParams, EvaluationOfEventTimeRelations.ParameterSettings params)
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