org.apache.ctakes.clinicalpipeline.ae

Class ExtractionPrepAnnotator

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

org.apache.ctakes.clinicalpipeline.ae.ExtractionPrepAnnotator

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

@PipeBitInfo(name="Extraction Prepper",
             description="Assigns IDs and Canonical text to Identified Annotations.",
             dependencies={SECTION,IDENTIFIED_ANNOTATION})
public class ExtractionPrepAnnotator
extends org.apache.uima.analysis_component.JCasAnnotator_ImplBase

UIMA annotator that prepares the CAS for output - performs some (final) updates to the CAS

Author:

Mayo Clinic

Constructor Summary

Constructors

Constructor and Description
ExtractionPrepAnnotator()

Method Summary

Modifier and Type	Method and Description
void	initialize(org.apache.uima.UimaContext aCtx) Method invoked by UIMA framework to initialize this annotator
void	process(org.apache.uima.jcas.JCas jcas) Method invoked by UIMA framework to process a document

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExtractionPrepAnnotator

public ExtractionPrepAnnotator()

Method Detail

initialize

public void initialize(org.apache.uima.UimaContext aCtx)
                throws org.apache.uima.resource.ResourceInitializationException

Method invoked by UIMA framework to initialize this annotator

Specified by:

initialize in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

initialize in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

Throws:

org.apache.uima.resource.ResourceInitializationException

process

public void process(org.apache.uima.jcas.JCas jcas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Method invoked by UIMA framework to process a document

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException