Uses of Interface
org.apache.ctakes.dictionary.lookup2.concept.Concept

Packages that use Concept

Package	Description
org.apache.ctakes.dictionary.lookup2.concept
org.apache.ctakes.dictionary.lookup2.consumer

Uses of Concept in org.apache.ctakes.dictionary.lookup2.concept

Classes in org.apache.ctakes.dictionary.lookup2.concept that implement Concept

Modifier and Type	Class and Description
class	DefaultConcept Author: SPF Affiliation: CHIP-NLP Date: 11/20/13

Methods in org.apache.ctakes.dictionary.lookup2.concept that return Concept

Modifier and Type	Method and Description
Concept	BsvConceptFactory.createConcept(Long cuiCode)
Concept	ConceptFactory.createConcept(Long cuiCode)
Concept	JdbcConceptFactory.createConcept(Long cuiCode)
Concept	MemConceptFactory.createConcept(Long cuiCode)
Concept	UmlsJdbcConceptFactory.createConcept(Long cuiCode)

Methods in org.apache.ctakes.dictionary.lookup2.concept that return types with arguments of type Concept

Modifier and Type	Method and Description
Map<Long,Concept>	AbstractConceptFactory.createConcepts(Collection<Long> cuiCodes) Only creates non-empty concepts; Cuis for which additional info does not exist don't create concepts
Map<Long,Concept>	BsvConceptFactory.createConcepts(Collection<Long> cuiCodes)
Map<Long,Concept>	ConceptFactory.createConcepts(Collection<Long> cuiCodes)
Map<Long,Concept>	UmlsJdbcConceptFactory.createConcepts(Collection<Long> cuiCodes)

Constructor parameters in org.apache.ctakes.dictionary.lookup2.concept with type arguments of type Concept

Constructor and Description
MemConceptFactory(String name, Map<Long,Concept> conceptMap)

Uses of Concept in org.apache.ctakes.dictionary.lookup2.consumer

Methods in org.apache.ctakes.dictionary.lookup2.consumer with parameters of type Concept

Modifier and Type	Method and Description
Collection<UmlsConcept>	DefaultUmlsConceptCreator.createUmlsConcepts(org.apache.uima.jcas.JCas jcas, String codingScheme, String tui, Concept concept)
Collection<UmlsConcept>	UmlsConceptCreator.createUmlsConcepts(org.apache.uima.jcas.JCas jcas, String codingScheme, String tui, Concept concept)

Method parameters in org.apache.ctakes.dictionary.lookup2.consumer with type arguments of type Concept

Modifier and Type	Method and Description
void	AbstractTermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	AbstractTermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	SemanticCleanupTermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts) Refine a collection of dictionary terms to only contain the most specific variations: "colon cancer" instead of "cancer", performed by span inclusion /complete containment, not overlap.
void	SemanticCleanupTermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts) Refine a collection of dictionary terms to only contain the most specific variations: "colon cancer" instead of "cancer", performed by span inclusion /complete containment, not overlap.
void	TermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	TermConsumer.consumeHits(org.apache.uima.jcas.JCas jcas, RareWordDictionary dictionary, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	DefaultTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String codingScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	DefaultTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String codingScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	PrecisionTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String defaultScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> semanticTerms, CollectionMap<Long,Concept,? extends Collection<Concept>> conceptMap) Only uses the largest spans for the type
void	PrecisionTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String defaultScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> semanticTerms, CollectionMap<Long,Concept,? extends Collection<Concept>> conceptMap) Only uses the largest spans for the type
void	SemanticCleanupTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String defaultScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> semanticTerms, CollectionMap<Long,Concept,? extends Collection<Concept>> conceptMap)
void	SemanticCleanupTermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String defaultScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> semanticTerms, CollectionMap<Long,Concept,? extends Collection<Concept>> conceptMap)
void	TermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String codingScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
void	TermConsumer.consumeTypeIdHits(org.apache.uima.jcas.JCas jcas, String codingScheme, int cTakesSemantic, CollectionMap<TextSpan,Long,? extends Collection<Long>> textSpanCuis, CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
protected static Collection<Integer>	AbstractTermConsumer.getUsedcTakesSemantics(CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
protected static Collection<Integer>	AbstractTermConsumer.getUsedcTakesSemantics(CollectionMap<Long,Concept,? extends Collection<Concept>> cuiConcepts)
protected static boolean	AbstractTermConsumer.hascTakesSemantic(Integer cTakesSemantic, Iterable<Concept> concepts)