org.apache.ctakes.ytex.R

Class RGramMatrixExporterImpl

java.lang.Object

org.apache.ctakes.ytex.R.RGramMatrixExporterImpl

All Implemented Interfaces:

RGramMatrixExporter

public class RGramMatrixExporterImpl
extends java.lang.Object
implements RGramMatrixExporter

Field Summary

Fields

Modifier and Type	Field and Description
private InstanceDataExporter	instanceDataExporter
private KernelEvaluationDao	kernelEvaluationDao
private KernelUtil	kernelUtil
private static Log	log

Constructor Summary

Constructors

Constructor and Description
RGramMatrixExporterImpl()

Method Summary

Methods

Modifier and Type	Method and Description
private void	exportGramMatrices(java.lang.String name, java.lang.String experiment, double param1, java.lang.String param2, java.lang.String splitName, java.lang.String scope, java.lang.String outdir, InstanceData instanceData)
void	exportGramMatrix(java.util.Properties props)
private void	exportGramMatrix(java.lang.String name, java.lang.String experiment, double param1, java.lang.String param2, java.lang.String splitName, java.lang.String outdir, InstanceData instanceData, java.lang.String label, int run, int fold)
InstanceDataExporter	getInstanceDataExporter()
KernelEvaluationDao	getKernelEvaluationDao()
KernelUtil	getKernelUtil()
static void	main(java.lang.String[] args)
private void	outputGramMatrix(double[][] gramMatrix, java.util.SortedSet<java.lang.Long> instanceIds, java.lang.String dataFilePrefix)
void	setInstanceDataExporter(InstanceDataExporter instanceDataExporter)
void	setKernelEvaluationDao(KernelEvaluationDao kernelEvaluationDao)
void	setKernelUtil(KernelUtil kernelUtil)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

log

private static final Log log

instanceDataExporter

private InstanceDataExporter instanceDataExporter

kernelEvaluationDao

private KernelEvaluationDao kernelEvaluationDao

kernelUtil

private KernelUtil kernelUtil

Constructor Detail

RGramMatrixExporterImpl

public RGramMatrixExporterImpl()

Method Detail

main

public static void main(java.lang.String[] args)
                 throws java.io.IOException

Throws:

java.io.IOException

exportGramMatrices

private void exportGramMatrices(java.lang.String name,
                      java.lang.String experiment,
                      double param1,
                      java.lang.String param2,
                      java.lang.String splitName,
                      java.lang.String scope,
                      java.lang.String outdir,
                      InstanceData instanceData)
                         throws java.io.IOException

Throws:

java.io.IOException

exportGramMatrix

private void exportGramMatrix(java.lang.String name,
                    java.lang.String experiment,
                    double param1,
                    java.lang.String param2,
                    java.lang.String splitName,
                    java.lang.String outdir,
                    InstanceData instanceData,
                    java.lang.String label,
                    int run,
                    int fold)
                       throws java.io.IOException

Throws:

java.io.IOException

exportGramMatrix

public void exportGramMatrix(java.util.Properties props)
                      throws java.io.IOException

Specified by:

exportGramMatrix in interface RGramMatrixExporter

Throws:

java.io.IOException

getInstanceDataExporter

public InstanceDataExporter getInstanceDataExporter()

getKernelEvaluationDao

public KernelEvaluationDao getKernelEvaluationDao()

getKernelUtil

public KernelUtil getKernelUtil()

outputGramMatrix

private void outputGramMatrix(double[][] gramMatrix,
                    java.util.SortedSet<java.lang.Long> instanceIds,
                    java.lang.String dataFilePrefix)
                       throws java.io.IOException

Throws:

java.io.IOException

setInstanceDataExporter

public void setInstanceDataExporter(InstanceDataExporter instanceDataExporter)

setKernelEvaluationDao

public void setKernelEvaluationDao(KernelEvaluationDao kernelEvaluationDao)

setKernelUtil

public void setKernelUtil(KernelUtil kernelUtil)