org.apache.ctakes.typesystem.type.textsem

Class DiseaseDisorderMention_Type

java.lang.Object

Annotation_Type

org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type

org.apache.ctakes.typesystem.type.textsem.EventMention_Type

org.apache.ctakes.typesystem.type.textsem.DiseaseDisorderMention_Type

public class DiseaseDisorderMention_Type
extends EventMention_Type

A text string that refers to a (DiseaseDisorder) Event. This is from the UMLS semantic group of Disorders (except that Sign and Symptom types are separate). Based on generic Clinical Element Models (CEMs) Updated by JCasGen Wed Sep 30 11:06:15 EDT 2015

Field Summary

Fields

Modifier and Type	Field and Description
(package private) Feature	casFeat_alleviatingFactor
(package private) Feature	casFeat_associatedSignSymptom
(package private) Feature	casFeat_bodyLaterality
(package private) Feature	casFeat_bodyLocation
(package private) Feature	casFeat_bodySide
(package private) Feature	casFeat_course
(package private) Feature	casFeat_duration
(package private) Feature	casFeat_endTime
(package private) Feature	casFeat_exacerbatingFactor
(package private) Feature	casFeat_relativeTemporalContext
(package private) Feature	casFeat_severity
(package private) Feature	casFeat_startTime
(package private) int	casFeatCode_alleviatingFactor
(package private) int	casFeatCode_associatedSignSymptom
(package private) int	casFeatCode_bodyLaterality
(package private) int	casFeatCode_bodyLocation
(package private) int	casFeatCode_bodySide
(package private) int	casFeatCode_course
(package private) int	casFeatCode_duration
(package private) int	casFeatCode_endTime
(package private) int	casFeatCode_exacerbatingFactor
(package private) int	casFeatCode_relativeTemporalContext
(package private) int	casFeatCode_severity
(package private) int	casFeatCode_startTime
static boolean	featOkTst
private FSGenerator	fsGenerator
static int	typeIndexID

Fields inherited from class org.apache.ctakes.typesystem.type.textsem.EventMention_Type

casFeat_event, casFeatCode_event

Fields inherited from class org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type

casFeat_conditional, casFeat_confidence, casFeat_discoveryTechnique, casFeat_generic, casFeat_historyOf, casFeat_id, casFeat_ontologyConceptArr, casFeat_originalText, casFeat_polarity, casFeat_segmentID, casFeat_sentenceID, casFeat_subject, casFeat_typeID, casFeat_uncertainty, casFeatCode_conditional, casFeatCode_confidence, casFeatCode_discoveryTechnique, casFeatCode_generic, casFeatCode_historyOf, casFeatCode_id, casFeatCode_ontologyConceptArr, casFeatCode_originalText, casFeatCode_polarity, casFeatCode_segmentID, casFeatCode_sentenceID, casFeatCode_subject, casFeatCode_typeID, casFeatCode_uncertainty

Constructor Summary

Constructors

Constructor and Description
DiseaseDisorderMention_Type(JCas jcas, Type casType) initialize variables to correspond with Cas Type and Features

Method Summary

Methods

Modifier and Type	Method and Description
int	getAlleviatingFactor(int addr)
int	getAssociatedSignSymptom(int addr)
int	getBodyLaterality(int addr)
int	getBodyLocation(int addr)
int	getBodySide(int addr)
int	getCourse(int addr)
int	getDuration(int addr)
int	getEndTime(int addr)
int	getExacerbatingFactor(int addr)
protected FSGenerator	getFSGenerator()
int	getRelativeTemporalContext(int addr)
int	getSeverity(int addr)
int	getStartTime(int addr)
void	setAlleviatingFactor(int addr, int v)
void	setAssociatedSignSymptom(int addr, int v)
void	setBodyLaterality(int addr, int v)
void	setBodyLocation(int addr, int v)
void	setBodySide(int addr, int v)
void	setCourse(int addr, int v)
void	setDuration(int addr, int v)
void	setEndTime(int addr, int v)
void	setExacerbatingFactor(int addr, int v)
void	setRelativeTemporalContext(int addr, int v)
void	setSeverity(int addr, int v)
void	setStartTime(int addr, int v)

Methods inherited from class org.apache.ctakes.typesystem.type.textsem.EventMention_Type

getEvent, setEvent

Methods inherited from class org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation_Type

getConditional, getConfidence, getDiscoveryTechnique, getGeneric, getHistoryOf, getId, getOntologyConceptArr, getOntologyConceptArr, getOriginalText, getOriginalText, getPolarity, getSegmentID, getSentenceID, getSubject, getTypeID, getUncertainty, setConditional, setConfidence, setDiscoveryTechnique, setGeneric, setHistoryOf, setId, setOntologyConceptArr, setOntologyConceptArr, setOriginalText, setOriginalText, setPolarity, setSegmentID, setSentenceID, setSubject, setTypeID, setUncertainty

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

fsGenerator

private final FSGenerator fsGenerator

typeIndexID

public static final int typeIndexID

featOkTst

public static final boolean featOkTst

casFeat_alleviatingFactor

final Feature casFeat_alleviatingFactor

casFeatCode_alleviatingFactor

final int casFeatCode_alleviatingFactor

casFeat_associatedSignSymptom

final Feature casFeat_associatedSignSymptom

casFeatCode_associatedSignSymptom

final int casFeatCode_associatedSignSymptom

casFeat_bodyLaterality

final Feature casFeat_bodyLaterality

casFeatCode_bodyLaterality

final int casFeatCode_bodyLaterality

casFeat_bodySide

final Feature casFeat_bodySide

casFeatCode_bodySide

final int casFeatCode_bodySide

casFeat_bodyLocation

final Feature casFeat_bodyLocation

casFeatCode_bodyLocation

final int casFeatCode_bodyLocation

casFeat_course

final Feature casFeat_course

casFeatCode_course

final int casFeatCode_course

casFeat_duration

final Feature casFeat_duration

casFeatCode_duration

final int casFeatCode_duration

casFeat_endTime

final Feature casFeat_endTime

casFeatCode_endTime

final int casFeatCode_endTime

casFeat_exacerbatingFactor

final Feature casFeat_exacerbatingFactor

casFeatCode_exacerbatingFactor

final int casFeatCode_exacerbatingFactor

casFeat_startTime

final Feature casFeat_startTime

casFeatCode_startTime

final int casFeatCode_startTime

casFeat_relativeTemporalContext

final Feature casFeat_relativeTemporalContext

casFeatCode_relativeTemporalContext

final int casFeatCode_relativeTemporalContext

casFeat_severity

final Feature casFeat_severity

casFeatCode_severity

final int casFeatCode_severity

Constructor Detail

DiseaseDisorderMention_Type

public DiseaseDisorderMention_Type(JCas jcas,
                           Type casType)

initialize variables to correspond with Cas Type and Features

Parameters:

jcas - JCas

casType - Type

Method Detail

getFSGenerator

protected FSGenerator getFSGenerator()

Overrides:

getFSGenerator in class EventMention_Type

Returns:

the generator for this type

getAlleviatingFactor

public int getAlleviatingFactor(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setAlleviatingFactor

public void setAlleviatingFactor(int addr,
                        int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getAssociatedSignSymptom

public int getAssociatedSignSymptom(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setAssociatedSignSymptom

public void setAssociatedSignSymptom(int addr,
                            int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getBodyLaterality

public int getBodyLaterality(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setBodyLaterality

public void setBodyLaterality(int addr,
                     int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getBodySide

public int getBodySide(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setBodySide

public void setBodySide(int addr,
               int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getBodyLocation

public int getBodyLocation(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setBodyLocation

public void setBodyLocation(int addr,
                   int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getCourse

public int getCourse(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setCourse

public void setCourse(int addr,
             int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getDuration

public int getDuration(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setDuration

public void setDuration(int addr,
               int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getEndTime

public int getEndTime(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setEndTime

public void setEndTime(int addr,
              int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getExacerbatingFactor

public int getExacerbatingFactor(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setExacerbatingFactor

public void setExacerbatingFactor(int addr,
                         int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getStartTime

public int getStartTime(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setStartTime

public void setStartTime(int addr,
                int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getRelativeTemporalContext

public int getRelativeTemporalContext(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setRelativeTemporalContext

public void setRelativeTemporalContext(int addr,
                              int v)

Parameters:

addr - low level Feature Structure reference

v - value to set

getSeverity

public int getSeverity(int addr)

Parameters:

addr - low level Feature Structure reference

Returns:

the feature value

setSeverity

public void setSeverity(int addr,
               int v)

Parameters:

addr - low level Feature Structure reference

v - value to set