public class EvaluationOfI2B2TemporalRelations extends EvaluationOfTemporalRelations_ImplBase
Modifier and Type | Class and Description |
---|---|
static class |
EvaluationOfI2B2TemporalRelations.AddClosure |
static class |
EvaluationOfI2B2TemporalRelations.AddFlippedOverlap |
static class |
EvaluationOfI2B2TemporalRelations.FindLongDisRelations |
static class |
EvaluationOfI2B2TemporalRelations.RemoveNonTLINKRelations |
static class |
EvaluationOfI2B2TemporalRelations.RemoveNullArgumentRelations
public static class RemoveEventEventRelations extends JCasAnnotator_ImplBase {
public static final String PARAM_RELATION_VIEW = "RelationView";
|
static class |
EvaluationOfI2B2TemporalRelations.RemoveRelations
public static class RemoveCrossSentenceRelations extends JCasAnnotator_ImplBase {
public static final String PARAM_SENTENCE_VIEW = "SentenceView";
|
(package private) static interface |
EvaluationOfI2B2TemporalRelations.TempRelOptions |
EvaluationOfTemporalRelations_ImplBase.PreserveEventEventRelations, EvaluationOfTemporalRelations_ImplBase.RemoveGoldAttributes, EvaluationOfTemporalRelations_ImplBase.RemoveNonContainsRelations
Evaluation_ImplBase.CopyFromGold, Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations, Evaluation_ImplBase.EntityMentionRemover, Evaluation_ImplBase.EventMentionRemover, Evaluation_ImplBase.Options, Evaluation_ImplBase.RemoveEnclosedLookupWindows, Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator, Evaluation_ImplBase.Subcorpus, Evaluation_ImplBase.TimexAnnotationCorrector, Evaluation_ImplBase.UriToDocumentTextAnnotatorCtakes, Evaluation_ImplBase.WriteAnaforaXML, Evaluation_ImplBase.WriteI2B2XML, Evaluation_ImplBase.XMIReader, Evaluation_ImplBase.XMIWriter, Evaluation_ImplBase.XMLFormat
Modifier and Type | Field and Description |
---|---|
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allBagsParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allParams |
private boolean |
baseline |
private static java.lang.String |
EVENT_ADMISSION |
private static java.lang.String |
EVENT_DISCHARGE |
private static java.lang.String |
EVENT_EVENT |
private static java.lang.String |
EVENT_TIME |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
flatParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
ftParams |
protected boolean |
skipTrain |
private static java.lang.String |
TEMP_CROSSSENT |
private static java.lang.String |
TEMPET_CROSSSENT |
private static java.lang.String |
TIME_ADMISSION |
private static java.lang.String |
TIME_DISCHARGE |
protected boolean |
useClosure |
protected boolean |
useGoldAttributes |
DEFAULT_BOTH_DIRECTIONS, DEFAULT_DOWNSAMPLE, DEFAULT_LAMBDA, DEFAULT_SVM_C, DEFAULT_SVM_G, DEFAULT_TK, defaultParams, params, printRelations
GOLD_VIEW_NAME, i2b2Output, kernelParams, printErrors, printOverlapping, rawTextDirectory, subcorpus, treebankDirectory, xmiDirectory, xmlDirectory, xmlFormat
Constructor and Description |
---|
EvaluationOfI2B2TemporalRelations(java.io.File baseDirectory,
java.io.File rawTextDirectory,
java.io.File xmlDirectory,
Evaluation_ImplBase.XMLFormat xmlFormat,
Evaluation_ImplBase.Subcorpus subcorpus,
java.io.File xmiDirectory,
java.io.File treebankDirectory,
boolean useClosure,
boolean printErrors,
boolean printRelations,
boolean baseline,
boolean useGoldAttributes,
java.lang.String kernelParams,
EvaluationOfEventTimeRelations.ParameterSettings params) |
Modifier and Type | Method and Description |
---|---|
static void |
main(java.lang.String[] args) |
protected |
test(CollectionReader collectionReader,
java.io.File directory) |
protected void |
train(CollectionReader collectionReader,
java.io.File directory) |
correctArgOrder, formatRelation, printRelationAnnotations
getCollectionReader, getPreprocessorAggregateBuilder, getTestItems, getTrainItems, getXMIFile, getXMIFile, getXMIReadingPreprocessorAggregateBuilder, getXMIWritingPreprocessorAggregateBuilder, prepareXMIsFor, selectExact, setI2B2Output
protected static EvaluationOfEventTimeRelations.ParameterSettings flatParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allBagsParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allParams
protected static EvaluationOfEventTimeRelations.ParameterSettings ftParams
private static final java.lang.String EVENT_TIME
private static final java.lang.String EVENT_EVENT
private static final java.lang.String EVENT_DISCHARGE
private static final java.lang.String EVENT_ADMISSION
private static final java.lang.String TIME_DISCHARGE
private static final java.lang.String TIME_ADMISSION
private static final java.lang.String TEMP_CROSSSENT
private static final java.lang.String TEMPET_CROSSSENT
private boolean baseline
protected boolean useClosure
protected boolean useGoldAttributes
protected boolean skipTrain
public EvaluationOfI2B2TemporalRelations(java.io.File baseDirectory, java.io.File rawTextDirectory, java.io.File xmlDirectory, Evaluation_ImplBase.XMLFormat xmlFormat, Evaluation_ImplBase.Subcorpus subcorpus, java.io.File xmiDirectory, java.io.File treebankDirectory, boolean useClosure, boolean printErrors, boolean printRelations, boolean baseline, boolean useGoldAttributes, java.lang.String kernelParams, EvaluationOfEventTimeRelations.ParameterSettings params)
public static void main(java.lang.String[] args) throws java.lang.Exception
java.lang.Exception
protected void train(CollectionReader collectionReader, java.io.File directory) throws java.lang.Exception
java.lang.Exception
protectedtest(CollectionReader collectionReader, java.io.File directory) throws java.lang.Exception
java.lang.Exception