public class EvaluationOfBothEEAndETRelations extends EvaluationOfTemporalRelations_ImplBase
Modifier and Type | Class and Description |
---|---|
static class |
EvaluationOfBothEEAndETRelations.AddClosure |
static class |
EvaluationOfBothEEAndETRelations.AddContain2Overlap |
static class |
EvaluationOfBothEEAndETRelations.AddFlippedOverlap |
static class |
EvaluationOfBothEEAndETRelations.AddTransitiveContainsRelations |
static class |
EvaluationOfBothEEAndETRelations.RemoveCrossSentenceRelations |
static class |
EvaluationOfBothEEAndETRelations.RemoveNonTLINKRelations |
static class |
EvaluationOfBothEEAndETRelations.RemoveNonUMLSEvents |
static class |
EvaluationOfBothEEAndETRelations.RemoveRelations |
(package private) static interface |
EvaluationOfBothEEAndETRelations.TempRelOptions |
EvaluationOfTemporalRelations_ImplBase.PreserveEventEventRelations, EvaluationOfTemporalRelations_ImplBase.RemoveGoldAttributes, EvaluationOfTemporalRelations_ImplBase.RemoveNonContainsRelations
Evaluation_ImplBase.CopyFromGold, Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations, Evaluation_ImplBase.EntityMentionRemover, Evaluation_ImplBase.EventMentionRemover, Evaluation_ImplBase.Options, Evaluation_ImplBase.RemoveEnclosedLookupWindows, Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator, Evaluation_ImplBase.Subcorpus, Evaluation_ImplBase.TimexAnnotationCorrector, Evaluation_ImplBase.UriToDocumentTextAnnotatorCtakes, Evaluation_ImplBase.WriteAnaforaXML, Evaluation_ImplBase.WriteI2B2XML, Evaluation_ImplBase.XMIReader, Evaluation_ImplBase.XMIWriter, Evaluation_ImplBase.XMLFormat
Modifier and Type | Field and Description |
---|---|
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allBagsParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
allParams |
private boolean |
baseline |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
flatParams |
protected static EvaluationOfEventTimeRelations.ParameterSettings |
ftParams |
private static java.lang.Boolean |
recallModeEvaluation |
protected boolean |
skipTrain |
protected boolean |
useClosure |
protected boolean |
useGoldAttributes |
DEFAULT_BOTH_DIRECTIONS, DEFAULT_DOWNSAMPLE, DEFAULT_LAMBDA, DEFAULT_SVM_C, DEFAULT_SVM_G, DEFAULT_TK, defaultParams, params, printRelations
GOLD_VIEW_NAME, i2b2Output, kernelParams, printErrors, printOverlapping, rawTextDirectory, subcorpus, treebankDirectory, xmiDirectory, xmlDirectory, xmlFormat
Constructor and Description |
---|
EvaluationOfBothEEAndETRelations(java.io.File baseDirectory,
java.io.File rawTextDirectory,
java.io.File xmlDirectory,
Evaluation_ImplBase.XMLFormat xmlFormat,
Evaluation_ImplBase.Subcorpus subcorpus,
java.io.File xmiDirectory,
java.io.File treebankDirectory,
boolean useClosure,
boolean printErrors,
boolean printRelations,
boolean baseline,
boolean useGoldAttributes,
java.lang.String kernelParams,
EvaluationOfEventTimeRelations.ParameterSettings params) |
Modifier and Type | Method and Description |
---|---|
(package private) static void |
createRelation(JCas jCas,
Annotation arg1,
Annotation arg2,
java.lang.String category) |
static void |
main(java.lang.String[] args) |
protected |
test(CollectionReader collectionReader,
java.io.File directory) |
protected void |
train(CollectionReader collectionReader,
java.io.File directory) |
correctArgOrder, formatRelation, printRelationAnnotations
getCollectionReader, getPreprocessorAggregateBuilder, getTestItems, getTrainItems, getXMIFile, getXMIFile, getXMIReadingPreprocessorAggregateBuilder, getXMIWritingPreprocessorAggregateBuilder, prepareXMIsFor, selectExact, setI2B2Output
protected static EvaluationOfEventTimeRelations.ParameterSettings flatParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allBagsParams
protected static EvaluationOfEventTimeRelations.ParameterSettings allParams
protected static EvaluationOfEventTimeRelations.ParameterSettings ftParams
private static java.lang.Boolean recallModeEvaluation
private boolean baseline
protected boolean useClosure
protected boolean useGoldAttributes
protected boolean skipTrain
public EvaluationOfBothEEAndETRelations(java.io.File baseDirectory, java.io.File rawTextDirectory, java.io.File xmlDirectory, Evaluation_ImplBase.XMLFormat xmlFormat, Evaluation_ImplBase.Subcorpus subcorpus, java.io.File xmiDirectory, java.io.File treebankDirectory, boolean useClosure, boolean printErrors, boolean printRelations, boolean baseline, boolean useGoldAttributes, java.lang.String kernelParams, EvaluationOfEventTimeRelations.ParameterSettings params)
public static void main(java.lang.String[] args) throws java.lang.Exception
java.lang.Exception
protected void train(CollectionReader collectionReader, java.io.File directory) throws java.lang.Exception
java.lang.Exception
protectedtest(CollectionReader collectionReader, java.io.File directory) throws java.lang.Exception
java.lang.Exception
static void createRelation(JCas jCas, Annotation arg1, Annotation arg2, java.lang.String category)