org.apache.ctakes.clinicalpipeline.runtime

Class BagOfAnnotationsGenerator<T extends Annotation,K>

java.lang.Object

org.apache.ctakes.clinicalpipeline.runtime.BagOfAnnotationsGenerator<T,K>

Direct Known Subclasses:

BagOfCUIsGenerator

public abstract class BagOfAnnotationsGenerator<T extends Annotation,K>
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
private AnalysisEngine	ae
private java.lang.Class<T>	classOfT
private static java.lang.String	defaultAEPath
private java.lang.String	outputDir
private CollectionReader	reader

Constructor Summary

Constructors

Constructor and Description
BagOfAnnotationsGenerator(java.lang.String inputDir, java.lang.String outputDir)
BagOfAnnotationsGenerator(java.lang.String inputDir, java.lang.String outputDir, java.lang.String aePath)

Method Summary

Methods

Modifier and Type	Method and Description
protected abstract K	extractInformation(T t)
private java.lang.Class<T>	getClassOfT()
void	process()
private void	processCas(JCas jcas, java.lang.String outputFilename)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

outputDir

private java.lang.String outputDir

reader

private CollectionReader reader

ae

private AnalysisEngine ae

defaultAEPath

private static final java.lang.String defaultAEPath

See Also:

Constant Field Values

classOfT

private java.lang.Class<T extends Annotation> classOfT

Constructor Detail

BagOfAnnotationsGenerator

public BagOfAnnotationsGenerator(java.lang.String inputDir,
                         java.lang.String outputDir)
                          throws UIMAException,
                                 java.io.IOException

Parameters:

args -

Throws:

java.io.IOException

UIMAException

BagOfAnnotationsGenerator

public BagOfAnnotationsGenerator(java.lang.String inputDir,
                         java.lang.String outputDir,
                         java.lang.String aePath)
                          throws UIMAException,
                                 java.io.IOException

Throws:

UIMAException

java.io.IOException

Method Detail

process

public void process()
             throws UIMAException,
                    java.io.IOException

Throws:

UIMAException

java.io.IOException

processCas

private void processCas(JCas jcas,
              java.lang.String outputFilename)
                 throws java.io.FileNotFoundException

Throws:

java.io.FileNotFoundException

extractInformation

protected abstract K extractInformation(T t)

getClassOfT

private java.lang.Class<T> getClassOfT()